Gene Snas_5428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5428 
Symbol 
ID8886637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5758872 
End bp5759921 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content62% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003514153 
Protein GI291302875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGT CTCACCCCCT CACTCTCAAA ATCGGCCTCG CTATTGCGGC GGTGATGGTT 
CTGCCCCTCG TAGCTGTCGT CGCCCTAGCC ATCGTCGCCG TTTCAACCGA CGACGCGGCA
GAATCCGGTG GCGTGACCTG TTCGATCACG AAGAAGACAG CCACCGCCCT GGGACTCAGC
AAGACCCAAT TGGGCCACGC CGCCACCATC TACGAAGTCG CGCTCGACAA GAGCATGGGC
CGCCGCGCAG CCATCATCGG CATCGCCACC GCCATTCAGG AAAGCACCCT CCACAACTAC
GGCCACCTCG GCGACCGCAA CGACCACGAC TCCCTCGGCC TGTTTCAACA GCGCCCCTCG
GCTGGCTGGG GCTCGCCCAC TCAGATCACG AACCCGAAGT ACGCCGCGGG CAAATTCTTC
GATTCGTTGA AGAAGGTGAG CGGCTGGCAG TCCCTTCCGT TGACCGTCGC GGCCCAAACC
GTGCAGGGCT CAGCATTCCC CGACGCCTAC GCGAAACACG AACCCAAGGC CAAGAAGATC
GTGAACACGC TGGAGAATCC GCGAATCTGC GCCGCCGGCA CCGGATCAGG CAAATGGGCG
AAACCAGTGA ACGCTGGGAT CGTCTCCGGA TATCGGACCT CGGAACGCCC CGACCATCAC
GGCATTGACT TCGGCGCCGC CCGCGGAACC ACCATCAAGG CCGTCGGAGC CGGAACCGTC
AAGACCGTTA CGTGCAACGC ATCCACGGGA GCCGGGCAAC CATACAGCTG CAACATCGAC
GGAGGAGTCC ACATCATGGG GTGCGGCTGG TACGTCGAGA TCCAACACGC CGACAAGACC
GTCACCCGTT ACTGCCACAT GGTTTCCCGC CCATCGGTCA ACGAAGGCCA AAAGGTCAAC
GCTGGCCAGA AGCTCGGAAA GGTCGGCAAC TCAGGAAACT CCAGCGGCCC ACACCTCCAC
TTCGAGGCGC ACGGCGACTA TCCGGCAGAC CCTGGAAACG CGATCGACCC CAGGAAATAC
CTGAAGGATC GCGGAATTTC TGTCAGTTAA
 
Protein sequence
MSESHPLTLK IGLAIAAVMV LPLVAVVALA IVAVSTDDAA ESGGVTCSIT KKTATALGLS 
KTQLGHAATI YEVALDKSMG RRAAIIGIAT AIQESTLHNY GHLGDRNDHD SLGLFQQRPS
AGWGSPTQIT NPKYAAGKFF DSLKKVSGWQ SLPLTVAAQT VQGSAFPDAY AKHEPKAKKI
VNTLENPRIC AAGTGSGKWA KPVNAGIVSG YRTSERPDHH GIDFGAARGT TIKAVGAGTV
KTVTCNASTG AGQPYSCNID GGVHIMGCGW YVEIQHADKT VTRYCHMVSR PSVNEGQKVN
AGQKLGKVGN SGNSSGPHLH FEAHGDYPAD PGNAIDPRKY LKDRGISVS