Gene Snas_5344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5344 
Symbol 
ID8886553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5677070 
End bp5677915 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514071 
Protein GI291302793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.292317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA GGTTCATCAC ATTCGGCATC ATCACCACGG CTTTGGTGGC GTTCGGCGCC 
GCCTTCGGTA TCCACGCGTT CTCGGACACG CTGTTGCAGA CCACGTCCGG TAACTCCAAG
ACACTGACGA TCGCCCCCGA GGGCGACACC GACGTCGACG TGGACATCGA CGGCTTCGCC
AACTGGGCGC TGCTCGACCG CTCCAGCGGC GACATCGAGG GAGCCAACCT GAAGGAGACC
TCGACCCCGC AGTCCATGAT CAAACCGTGG CTGGTCGCCG ACTATCTGCG GCAGGCCGAA
TCCGACGCGC CGCCGCTGCT CGACAGTGCC TCGGCGGCGA TCCGGATCAG CGATGACGAA
GCCGCCCAGA CCATCTACGA GGAGCTCGGC GAGGACGCGT CGATCGAGCG GCTCATCTCC
ACCTGCGCCC TGACCGACAC GACTGTCTTC CCCGGCCGGT GGAGCAAGAC CGAGATGTCG
GTTCGCGACG CCGCCCGCAT GGGGGAGTGC GTCGCCGACG GCCGCGCCGC GGGCCCGTGG
ACGAAGTGGC TGCTGAACGA GATGCGGCAC GTGCGCGGCA GCACCGCCGA CGAGGACCAG
CACGCCACCT CCGGCGGTGG CCGGTGGGGC ATCATCGACG GCCTGCCCGC ATCGCTGCGC
GACGAGGTCG CCATCAAGAA CGGCTGGACC CGGATGGCCG ACGGCGACTG GGATCTCAAC
TGCCTGGCCA TCCACGACGA CTGGGTGCTG GCCATCATGA TGGGCTACTC CGGCGACCGC
TCCCTCGACT ACGGGGCCGA CCGCTGCCGG GCGATCACCG AGCAGCTGTT CGGGTCCGGG
GCGTGA
 
Protein sequence
MTRRFITFGI ITTALVAFGA AFGIHAFSDT LLQTTSGNSK TLTIAPEGDT DVDVDIDGFA 
NWALLDRSSG DIEGANLKET STPQSMIKPW LVADYLRQAE SDAPPLLDSA SAAIRISDDE
AAQTIYEELG EDASIERLIS TCALTDTTVF PGRWSKTEMS VRDAARMGEC VADGRAAGPW
TKWLLNEMRH VRGSTADEDQ HATSGGGRWG IIDGLPASLR DEVAIKNGWT RMADGDWDLN
CLAIHDDWVL AIMMGYSGDR SLDYGADRCR AITEQLFGSG A