Gene Snas_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4110 
Symbol 
ID8885311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4380373 
End bp4381296 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID 
Productdihydrodipicolinate synthetase 
Protein accessionYP_003512854 
Protein GI291301576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.306204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG AAAAGCTCGA CGGCGTCATC GTCGCCACCG CCCTCCCCTA CGCCGAGGAC 
TCCTCGGCCC CCGCCGGGCT GCGCCCCGAT CTGGACAAGT TCGCCGAGCA CTGCCGCTGG
GTGGTCGACA GCGGCTGTCG GGGCGTGGGC CCCAACGGTT CGCTGGGCGA GTACTCCTCG
CTCACCGCCG AGGAGCGGCG CGCCGTCGCC CGGACCGCCA TCGAGGCGGT CGGCGATGAC
GGGGTCGTGG TCGTCGGCGT GCACGGCGTC GGCGCGCACC AGGCGCGCGA GTGGGCCGAG
AAGGCCGCCG AGGACGGCGC CGACGGCGTG CTGTGCCTGC CGCCCACCAT GTTCCGGGCC
AACGACCGTG AGGTGGTCCA CCACTTCGAG CAGGTCGCCG CCGTCGGGTT GCCCGTGATG
GTCTACAACA ACCCGATTGA CACCAAAGTG GACATGTCCC CGACGGTGCT CGCCGAGATC
GCGCAGCTCG ACAACGTCGT GGCGGTCAAG GAGTTCTCCG GCGACGTGCG GCGGGTCCTG
GAGATCCGCG AGCTCGCGCC CGAGCTGACC GTCGTCGCCG GGGCCGACGA CGTGGCGCTG
GAGTCGCTGT TGATGGGTGC GAGCGGGTGG TTCGCCGGGT TCCCGAACGT GTTCCCCGCC
GAGTCGGCGC GGCTGTTCGA ACTGGCACGG GCCGGGAAGC TGGCCGAGGC CCGGGCGCTG
TACGAACCGC TGGTGGCCGC GTTCCGGTGG GACTCGCGGG TGGAGTTCGT GCAGGCCATC
AAACGCGGCA TGGACCTGGT GGGACGGTTC GGCGGCGTGT GCCGTCCGCC GCGCGGCCCG
CTGTCCGACG AACAGCTCGC GGCCCTGGAC GCCGACATGC GCAAGGCCAT GGACTACCTG
GCGGCGAACC CCGTGGCGGC CTGA
 
Protein sequence
MTSEKLDGVI VATALPYAED SSAPAGLRPD LDKFAEHCRW VVDSGCRGVG PNGSLGEYSS 
LTAEERRAVA RTAIEAVGDD GVVVVGVHGV GAHQAREWAE KAAEDGADGV LCLPPTMFRA
NDREVVHHFE QVAAVGLPVM VYNNPIDTKV DMSPTVLAEI AQLDNVVAVK EFSGDVRRVL
EIRELAPELT VVAGADDVAL ESLLMGASGW FAGFPNVFPA ESARLFELAR AGKLAEARAL
YEPLVAAFRW DSRVEFVQAI KRGMDLVGRF GGVCRPPRGP LSDEQLAALD ADMRKAMDYL
AANPVAA