Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3609 |
Symbol | |
ID | 8884808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3839105 |
End bp | 3840292 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | phage/plasmid-related protein TIGR03299 |
Protein accession | YP_003512362 |
Protein GI | 291301084 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00236551 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGG CCTTCGACGT CAACGACGCG TTCGCCCAGG CCAAGCTCGA CCAGATCCGC GCCGCCGATA ACCAACAAGC CGCCATCGCC GCGCAAGTCG CCCGCGGCGA CCTCCAGCCC CTGGGAGGCG ACACCTACCG CGTCATGACC GGGTGGGATC GCGGCGAGAT CATCGCCTAC GACACCGTCC AGGGCATCAT CGCCCACCAT GGACTGGACA CCACCACCGG ACAAGCCGCC CTGTACAGCG CCGCACCGCC CTGGCACGGG CTGGGCTGCT ACATCCCCGG CGGCACCCGC GACATCGACG AAGTCTTGAA ACTGTCGCGA CTGGACTTCA CCGTGCACAC CACCCCCGCC TTGTACCAAT GGGACGATCA GCTGCACACC CACCCGGACA AGTTCCACAC CCTACGCTCC GACACGGCCG CGCCGTTGGG TGTCGTGGGA TCCAAGTACC ACACGGTGCA AAACCGCGAA TGCTTCGAGT TCTTGCGGAA CCTCGTCGAG TCCTACGACG TGGTGTGGGA GTCGGCCGGT GCGGTGCGCG GCGGGCGCCG CACCTTCGTG TCCATGCGGC TGCCCGACAC CGTCACCGTC GACGCCGCCG GCATCAACGA CACCATTACC CCGTTTGTGG TGGTGTTCAA CTCCCACGAC GGATCCTCAT CGATCACCGC CGTGGTCACC CCGTATCGGC CGGTGTGCGC CAACACCGAA CGCCTGGCGC TGGACAACGC CTACACCTCG TGGAGCATTC GCCACACCGA ATCGGCCATG CATCAAATGC GCCAAGCACG CCGCACCCTG AAAATGTCGG TGAAGTACTA CGACGAGTTC GCCGCCCAGC AAACCACGCT GGCACACCAT GACATGGTCA TCGACGAGTT TCGCGCGCTC ATCGACGAGT TGTGGCCGCT TGAACCCAAC GCCACCAAAC GCGGCAAGAC CAACGCCAAG AATCGGCGCG AGGCCTTGAT GGCCCAATGG GACACCGAAT CGCGCCGCTG CGGGTCCACC TTGTACGCCG CCGAGCGCGC CATCACCGGC TACATCGACC ACGACAAGCC CCGCATGCTC GGCAAGTTCT CCACCCTAAA CGCCGCTAGG GCCACCGCGA TTGTCGAAGG CCGCGACGAC GGCCTCAAGA CCAAAGCCCA CAAAAAACTC ATGCTGCGCG TTCGCTGA
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Protein sequence | MDAAFDVNDA FAQAKLDQIR AADNQQAAIA AQVARGDLQP LGGDTYRVMT GWDRGEIIAY DTVQGIIAHH GLDTTTGQAA LYSAAPPWHG LGCYIPGGTR DIDEVLKLSR LDFTVHTTPA LYQWDDQLHT HPDKFHTLRS DTAAPLGVVG SKYHTVQNRE CFEFLRNLVE SYDVVWESAG AVRGGRRTFV SMRLPDTVTV DAAGINDTIT PFVVVFNSHD GSSSITAVVT PYRPVCANTE RLALDNAYTS WSIRHTESAM HQMRQARRTL KMSVKYYDEF AAQQTTLAHH DMVIDEFRAL IDELWPLEPN ATKRGKTNAK NRREALMAQW DTESRRCGST LYAAERAITG YIDHDKPRML GKFSTLNAAR ATAIVEGRDD GLKTKAHKKL MLRVR
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