Gene Snas_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3158 
Symbol 
ID8884357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3336119 
End bp3336439 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content64% 
IMG OID 
ProductDNA-directed RNA polymerase omega subunit 
Protein accessionYP_003511922 
Protein GI291300644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.281429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000123273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTGGAA CCGTCGCTGA CCCGACCGGA ATCACCAAAC CTCCGATCGA CGACCTGCTC 
GAGAAGACTC ACTCCAAGTA CCAGCTGGTC ATCTACGGCG CCAAGCGTGC CCGTCAGATC
AACGCCTACT ACAGCCAGCT CGGTGAGGGC CTGCTGGAGT ACGTGGGACC GCTGGTGGAG
ACCACGCCGC AGGAGAAGTC GCTGTCGATC GCGCTGCGCG AGATCGACCA GGACCTGCTG
ATCACCGAGG CGCTTCCGGA CGTCGAGGAC ACCCCCAAGG GCCCCTCGGG TGTCCCGGCG
GTCGAGACCG ACATCATCTG A
 
Protein sequence
MSGTVADPTG ITKPPIDDLL EKTHSKYQLV IYGAKRARQI NAYYSQLGEG LLEYVGPLVE 
TTPQEKSLSI ALREIDQDLL ITEALPDVED TPKGPSGVPA VETDII