| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2889 |
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| Symbol | |
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| ID | 8884088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3040871 |
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| End bp | 3041950 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | xylose ABC transporter substrate-binding protein |
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| Protein accession | YP_003511657 |
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| Protein GI | 291300379 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0799239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTCA ACCGAAGAAG CCTTCTGACC TCGGCCGCCG GTCTCAGCAC CCTCGCCGTG
CTGGCCGCGT GCGGCGGCGC CGGTTCCGAG AAGGGCACCG TCGGCATCGC CATGCCCACC
AAGTCCTCCG AGCGCTGGAT CGCCGACGGC GACAACATGG TGGCCGCCTT CAAGAAGGCC
GGATTCGACA CCGACCTGCA GTACGCCGAG GACGTCATCG AAACCCAGGT CTCCCAGATC
GAGAACATGA TCACCAAGGG CGTCAAGGCC TTGGTGATCG CCCCGGTCGA CAACACCTCG
CTCACCGGCG CGCTGCAACA GGCCGCCGAC GCCGGTATCA AGGTCATCTC CTACGACCGG
CTCATCCGCG AGACCGACAA CGTCGACTAC TACGCCACCT TCGACAACTT CAAGGTCGGC
GAACTGCAAG GCGGCTACAT CGAGGAGAAA CTCAAACTCG CCGACGGCGA GGGCCCGTAC
AACATCGAAC TGTTCGCCGG TTCGGCCGAC GACAACAACA CCGCCTACTT CTTCGACGGC
GCCATGTCGA AACTCAAGCC GTACATCAAG TCCAAGAAGC TGGTCGTCCG CAGCGGACAG
ACCGACATGG ACGACGTGAC CACGCTGCGC TGGAACGGCG AGACCGCGCA GTCGCGAATG
GAGAACATCC TCAACGCCAA CTACGGCGAC GAACGCGTCG ACGCGGTCCT GTCGCCCTAC
GACGGCATCA GCCTGGGCAT CATCGCCGCG CTGCAAAGCG ACGGCTACGG CGAAGGAGAC
AAACCGCTGC CCGTGGTCAC CGGCCAGGAC GCCGAGATCG CGTCGGTCAA GTCGATCCTC
GCTGGGGAAC AGACCCAGAC CGTCTACAAG GACACCCGCA AGCTGGCCAA GCTCGCCGTC
GAGATGACCT CGGCGGCCAT CGACGGCAAG AAGGCCAAGA CCAACGACAC CGAGTCCTAC
GACAACGGCA AGAAGGTCGT CCCGGCGTAC CTGCTCAAAC CGGTGTCGGT CGACAAGGAC
AACGTCGAGG AAGCCCTCGT CGAGACCAAG CAGTACACGA AGAAGCAGCT GGGGCTGTGA
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| Protein sequence | MNLNRRSLLT SAAGLSTLAV LAACGGAGSE KGTVGIAMPT KSSERWIADG DNMVAAFKKA
GFDTDLQYAE DVIETQVSQI ENMITKGVKA LVIAPVDNTS LTGALQQAAD AGIKVISYDR
LIRETDNVDY YATFDNFKVG ELQGGYIEEK LKLADGEGPY NIELFAGSAD DNNTAYFFDG
AMSKLKPYIK SKKLVVRSGQ TDMDDVTTLR WNGETAQSRM ENILNANYGD ERVDAVLSPY
DGISLGIIAA LQSDGYGEGD KPLPVVTGQD AEIASVKSIL AGEQTQTVYK DTRKLAKLAV
EMTSAAIDGK KAKTNDTESY DNGKKVVPAY LLKPVSVDKD NVEEALVETK QYTKKQLGL
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