Gene Snas_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2827 
Symbol 
ID8884025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2975849 
End bp2976409 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003511596 
Protein GI291300318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.05215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.803833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAG CAGCCGCATC CGCCCGGCCC CCCGGCCGTC CCCGCAACAG CGTCGACGCC 
ACGGTCTTCG CGGCGACACT GAGCACTGTC GACGAACTCG GGTACGCGCG CGCCACCGTC
GACCGCATCG CGGCCGCCGC CGGGATCGCC AAGACCACGA TCTACCGGCG CTGGCCGACC
AAGGGCGCGC TGATCACCGC GTGCCTCATC GAGGCGTTCG GCCCGCTGCC GATGACCGCG
ACCACCCGGG AGGACTTCCT GGCGGAGTCG ATCCGCTTCG CGGCGGCGAA GATCGCCGAA
CCCGGTGTCG GCGCGGCGTT CGCGGGCGTG TTCACCGACG CCGTCAACGA CCCGGCACTG
CGCGAGATCC TGGCCACGCA GCTACAGGAG CCCTACCTGA TCGCCATCCG GGAAGTGCTG
GGCGAACCGG AGCACCGGGT GCTGTTCCTC ATCGACGTCA TCATCGGCAC CCTGTTGCAC
CGCATGGGCA TGACCGGGGA ACCGATGGTC GACGACGACG TCGACGCCCT GGTCGCGATG
ACCCTGCGGG TGCTGGACTG A
 
Protein sequence
MTRAAASARP PGRPRNSVDA TVFAATLSTV DELGYARATV DRIAAAAGIA KTTIYRRWPT 
KGALITACLI EAFGPLPMTA TTREDFLAES IRFAAAKIAE PGVGAAFAGV FTDAVNDPAL
REILATQLQE PYLIAIREVL GEPEHRVLFL IDVIIGTLLH RMGMTGEPMV DDDVDALVAM
TLRVLD