Gene Snas_2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2434 
Symbol 
ID8883629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2581477 
End bp2583030 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNa+/solute symporter 
Protein accessionYP_003511210 
Protein GI291299932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.401535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC AGCTGATCGC GGTCACGGTC GCCTGCGTCG CGGTCCTGGT GCTGGCGATA 
CTGGCCCGAC GCGGCCGCGA CGCCAACCTC GAGGAATGGT CGATCGCCGG ACGCGGCTTC
GGCAGCCTGT TCGTGTTCCT GCTGATGGCG GGGGAGATCT ACACGACGGT CACCTTCCTG
GGCACCAGCG GATACGCCTA CAGCCTCGGC GGTCCCGCCG TCCACATCAT GGCCTACGCG
TGTCTGGCCT ATGTGATCTC CTACTGGCTG CTTCCCCCGG TGTGGCGGTA CGCCCAGCGC
CACAAACTGG TGTCCGCTGT GGAGCTGTAC GAGCACCTGT ACGCCAGCCG CCTTGTCGGT
GTCGTCGTCG GCGTCGTCGC GGTCGCCGCC CTGGTGCCGT ACCTCGCCGG GCAACTGCGC
GGCCTGGGAG CGATCGTCTC GCACACCTCG GGCGGCGCGG TGTCTCCCAC CCTGGCCATG
ATCGTCGGCA CCGTCGTGCT GTGCCTGTAC GTCATGATCT CCGGCATCCG CGGCTCGGCG
TGGACGGCCG TGGCCAAGGA CCTGCTCACC CTCGGCATCG TGCTGTTCCT GGGCATATAC
CTGCCGCTGC ACTACTTCGG CGGCTACGGC GAGATGTTCC GGCAGATCCA GGAAATCAAC
CCCGAACACC TGACCCTGCC CGCCGACGGA CTGTCGCCGA CCTGGTTCAG CACCACGGTC
CTGTTGATGT CACTGGGTTT CTTCATCTGG CCGCACACCA TGGGCGCCGC CCTGACCGCC
AAGGACGCCC GGGTCTTCCG CGTCAACGCC ACCGTCTCGC CGATCTACAG CCTGCTGCTG
CTCTTCGTCC TGTTCGTCGG CTTCGCCGCC GTGGTCAGGA TTCCCGGGCT CGGCGCCGAC
GAGACCGACC TGGCGCTGCT GCGACTGTCC TCGGCCACCT TCGACGACTG GCTCATGGGA
CTGGTCAGCG TCGCCGGCCT GTTGGCCGCA CTGGTGCCCG GCGCGGTCAT CCTCATCGCG
ATGGCCACCA CCATCGCCCG GGTCTTCTTC CGGGCCTGGC GCCCCGACGC CCCCGCCAGC
CAACTGAACC GCCTGGCGCG CAACGCGGTG CCGGTCATCG CCCTGGCCGG GTTCGCCGTC
GCCGTCGGCG AGGGCAAGAC CGTGGTCACC CTGCTGCTAC TGGGCTACGC CCTGGTCACC
CAACTGCTCC CGGCACTGGT CGGCGCCCTG CTGCCGGGCC CCAGCCCCAC CCGGGCCGGA
GTGATCGCCG GAATCACCAC CGGCGTCGCC GTCGTCATCG TCCTGAGCGT CACCACCACC
GCCGTATCGG CCTCCAGCAC GCTCGGCAGC GCCTTCCCGA ACATCGGTCC ACCATGGAGC
AGCGTCAACC TGGGCCTGGC CGCGCTGCTC GTCAACATCG CCGTGACCCT CGCGGTCAGT
GTCGCGACCC GTTCCCGGCC CCACTCCCAA CCCGACAACA TTCCCACCGC TACTTCGAGC
CCAGTCCAGG AGCGACTGAC TTCTGGTTCG CACTCTCCCA GTCAGAGGAC GTGA
 
Protein sequence
MSPQLIAVTV ACVAVLVLAI LARRGRDANL EEWSIAGRGF GSLFVFLLMA GEIYTTVTFL 
GTSGYAYSLG GPAVHIMAYA CLAYVISYWL LPPVWRYAQR HKLVSAVELY EHLYASRLVG
VVVGVVAVAA LVPYLAGQLR GLGAIVSHTS GGAVSPTLAM IVGTVVLCLY VMISGIRGSA
WTAVAKDLLT LGIVLFLGIY LPLHYFGGYG EMFRQIQEIN PEHLTLPADG LSPTWFSTTV
LLMSLGFFIW PHTMGAALTA KDARVFRVNA TVSPIYSLLL LFVLFVGFAA VVRIPGLGAD
ETDLALLRLS SATFDDWLMG LVSVAGLLAA LVPGAVILIA MATTIARVFF RAWRPDAPAS
QLNRLARNAV PVIALAGFAV AVGEGKTVVT LLLLGYALVT QLLPALVGAL LPGPSPTRAG
VIAGITTGVA VVIVLSVTTT AVSASSTLGS AFPNIGPPWS SVNLGLAALL VNIAVTLAVS
VATRSRPHSQ PDNIPTATSS PVQERLTSGS HSPSQRT