| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2269 |
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| Symbol | |
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| ID | 8883463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 2406208 |
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| End bp | 2413647 |
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| Gene Length | 7440 bp |
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| Protein Length | 2479 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | YD repeat protein |
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| Protein accession | YP_003511051 |
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| Protein GI | 291299773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGG ACGAGACACC ACCACCGAAC GGGAGGGACG CGGACGGCGG CCCGAGATCC
GGGACGGACT CCCCGGAATC TCCGTCCACA TTGCCGAAAG CCCCGGCCAT CTCGGCGCCC
ACCGGCGGCG GGGCGATCCG GGGGATCGGC GAGAAGTTCG CCGCCAACCC GGTGACCGGC
ACCGCCACCA CCACCGTCCC GATAGCCACC AGCCCCGGCC GCTCGGGCTT CGCTCCCAGC
CTCACCCTCG GCTATGACTC CGGCGCCGGA AACGGCCCCT TCGGACTCGG CTGGCAGCTG
CCGATTCCGA CGATCACCCG CAAGACCGAT CGGGGCCTGC CGCGATATCG TGCCGACGCT
CCCGACACGT TCATCCTGTC CGGCAGCGAG GACCTGGTCC CGCACGCGGA CGGGCCGTCG
CAGCGCGAAC TCGACGGCCG CGGCTACACC GTGCGGCGGT ACCTGCCCCG GATCGAGGGC
ACGTTCGCGC GCATCGAGCA GTGGCACGAC GATGCCGACG GCACCAGCCA CTGGCAGGTC
ATCTCGCGTG ACAACGTCAC CTCCCGGTAC GGCCGCACCC CGCACAGCCG GATCGCCGAC
CCCGACGATC CGTCCCGGAT CTACAGCTGG CTGCTGTGCG ACAGCTTCGA TCCGGTCGGC
AACGCGATCC ATTATGAGTA CAAGTCCGAG GACGCCGCCG GAGTCGATCT CGACAGTCCA
CATGAGGCCA ATCGCTCGGC GGCGGCACGG CACACTCAGC GGTATCTCAA ACGCATCCGT
TACGGCAACA CGGTTTCCCG GCTGCTCGAT CCGGACCTGA CCGAGACGTC CTGGCTGTTC
GAGGTCGTCT TCGACTACGG CGAGCACGAC GCCGAGGTCC CCACGCCCGC CGAAGCGCAC
CCGTGGCGAT GCCGTCCCGA CCCGTTCTCG CACTACCGCG CCGGTTTCGA GATCCGCGGT
TACCGGCTGT GCCAGCGCAT CCTGATGTTC CACCACTTCC CGGACGCCCC CGGCGTCGGC
GCCGACTGCC TGGTGCGATC CACGGACCTG GAGTACCGCC ACGACCCGGT CGGCAGCTTC
GTCGAGCGGC TGCACCAGCG CGGCTACCGG CGCGACGGCG ACGGCTACCG CGCCGGTTCG
CTGCCACCGC TGGACTTCAG CTACAGCAGG CCGGTCATCG ACGACACGCC CCGGCTGCTG
CCCGAGGACA GTCTGCGCAA CCTCCCCATC GGCGTCGACG GCCCGGGCTA CCAGTGGGTG
GACCTGGACG GCGAGGGGCT TCCGGGAATC CTGAGCTGGC ACGGCGACTC GCTGTTCTAC
AAACCGAACC TCGGCAATGG GCGGTTCGGG CCGGTGCGCG GCCTGGCCTC CCAGCCGTCC
ACCGGACTGG CCAAGGACAA ACAGCAGCTG CTCGACCTGG CCGGAGACGG ACAGGTCGAA
CTGGTGGACT TCGGCGGCCC CACCCCCGGC TTCTACGAAC GCGACACCGC CACAGCGCCC
GGCTGGCGCA ACTTCCGGGC CTTCGCGTCA CTGCCCAACC TGGACCCCAG CAACCCGAAC
CTGCGGTTCG TCGACCTGAC CGGCGACGGG CTGGCCGACG TGCTGATCAC CGAGGACGAG
GTGTTCACCT GGCACGAGTC GCTGGGGGAG AACGGTTTCG CGTCCGCGCG GCGCCACCAC
AGCGGTGCCG ACGAACGCGT CGGCCCCAGT CTCGTCTTCG ACGACGGCAC CGACTCGATC
CACCTGGCCG ACATGTCCGG CGGCGGACTG TCGGACCTGG TCCGGATCCG CAACGGCGAG
GTCTGCTACT GGCCGAGCCT CGGCTACGGC CGGTTCGGCG CCCGCGTCAC CATGGACGAC
TCACCGTGGT TCGACGAGCC GGAGTTCTTC GACCAGAAAC GGCTTCGGCT GGCCGACATC
GACGGCACCG GCGCCACCGA CCTGATCTAC CTGCACCGCG ACGAGACCCG GATCTACCGC
AACCGCAGCG GAAACGGCTG GGAAGCACCG CAGGGCCTGG CGACGTCGTT CCCGCAGCCG
CAGCACACCG CGCAGGTGAC GGTCGCCGAC CTGCTGGGCA CCGGCACCGC GTGTCTGGTG
TGGTCCTCGC CGCTGCCCGC CGACCAGGGG CGCCAGGTGT GGTACATCGA CCTGCTGGCG
CAGGGCAAAC CGCACCTGCT GACCGGAATG GTCAACAACC TCGGCTCCGA GACGTACATC
CACTATGCCC CGTCCACCAA GTTCTATCTG GACGATAACC AGGCTGGCCG ACCGTGGATC
ACCCGGCTGC CGTTCCCGGT GCACGTGGTG GAACGGGTGG AGACCGTCGA CCGCGTCAGC
CACCACCGCT TCGTGTCCCG CTACGCCTAC CACCACGGCT ACTTCGACGG CGCCGAACGC
GAGTTCCGGG GATTCGCGAT GGTCGAGCAA TGGGACACCG AAGCCTTCGC GGCCCTCAGC
GGCCCCGACG CCGACATCAC CAACGCGGAC GAGTACGGCT ACGTCCCGGC CACCCGCACC
AAGACCTGGT TCCACACCGG ATCGTTCGAG GAGGCCGGAC GGATCTCCCG GCAGCTGGCC
GGGGAGTACT ACGGACGCGA CGAACAGCTG CTGCTGCCCG ACACGGTGCT GCCGGAACAG
GAGCTGACCG ACGAGGAACT GCGGCAGGCG CATCGCGCGC TCAAGGGCCT GACACTGCGG
CAGGAGCTGT ACGCCGAGGA CGGCAACGCC GAAGCGGACC GTCCGTATCA GGTCTCCGAA
CAGAACTACA CGCTCCACAT GCGCCAGACC GCCGCCCGGG GGCAGTACGC GGTGTTCACC
GTGAACCCAC GCGAGACCAT CACCGCCCAC TATGAACGCG AATGCGACGA ACCCAGGGTC
GCGCACGAGA TCGTGCTGGC CACCGACGAC TTCGACAACA TCCTCACCGC CGTGTCGATC
GCCTACGGCC GTCGACAGGC CGACCCGGAA CTGACCGAGG ACGACGCGTG GCGGCAGCGC
CATTCGCAAC TGGCGCTGAC CGTCAACCAG TACACCAACG CCGTCGCCGG GCCCCACGAC
TACCGCGCGC CGCTGCTGTG GCAGCGCCGC GTCTACGAAC TTCTCGGCCT GGTTTCCTTG
CCAGGCAACC GGTTCGCGTT CGACACGCTC GCCGCCGCCG TCGACGGGGG ATCATCACGC
CGCATGATCG CGCAGTCCCG CACCCGCTAC CGACGCGACG ACCTGTCCGG ACCGCTGCCG
TGGGGCGAAC TGGAATCGTT GGCGCTGCCG CTGGACGACT ACCGCAAGGC GTTCACGCCG
GGGCTGCTGT CCGAACTGTA CGGCGACCGT GTGGACGCGC AGCTGCTCAC CGACAACCGG
TACCTGCGAC TGGACGAGGA CGACGGCTGG TGGCTCGGCA ACGGCAGGGT CCGGTATTCA
CCGGCCGGGC AGGACGAGCC CGCCCAGGAA CTGGCCGCCG CGCGGGCGCA CTTCTTCCTG
CCGCGCCGAT TCGCCGACCC GTTCGGCGCC GAGACCCTTG TGGACTACGA TCCCGCCGAC
CTGGAACCCA CCACCATCGT CGACGCCGTG GGCAACAGCA CCACCGCCGA ATACGACTTC
CGGGTGCTGG AACCGATACT GGTCACCGAC CCCAACGGCA ACCGCACCGC CACCGTCCAC
GACGCACTCG GCCTGGTGAC GGGCACCGCC CTGATGGGCA AGCAGGGCGA ACAACTGGGC
GACCTCCTGG ACGGCTTCGA CCCCGACCTG CCACCGGAAC GCGTCGCCGC ATACCTGGCC
GACCCGCTCG CCGACCCACA CGCGCTGCTG GGCAACGCCA CCACCCGGCT GGTCTACGAC
CAGTTCGCCT ATCTGCGGAC TCAACAACTG CCGCAACCGC AGCCCGCCGT GGCCGCGACA
CTGGCCCGCG AGACCCACGC GTCGGCACTG GCCGAAGGCG AGGTCACCAG GCTGCAACTG
TCGTTCACCT ACACCGACGG CTTCCAGCGC GAGATCCAGC GAAAAGTACA GGCCGAACCG
GGAAGCGACG GCGCGCCGCG CTGGGCGGGA ACCGGATGGA CGGTGTTCAA CAACAAGGGA
ATGCCGATCC GCGAATACGA ACCGTTCTTC GCGACGACCC ACGCCTTCGA GTTCGCCCGC
GCCGTCGGGG TCGGCACCGT CATGTTCTAC GACCCCTTGG GCCGCAAGGT GGCCGTGCTG
CACCCGGACG GGAGCTGGGA GAAGGTCGAC TTCGACCCGT GGCGGCAGAC CACATGGGAC
GTCAACGACA CGGTGCTGCT CGACCCCCGC ACCGACCCGC ACGTCGGCGG CTATCTGACG
CCCTACCTGG ACACGCTTCC CGACTGGCGC ACCTGGTACC GGCGGCGATC CGAGGGCGAC
CTCGGCCCGA CCGAACAGGC CGCGGCATCG GCAGCGGCCG TCCACTCCGG AACCCCGGCG
CGGATCTGGC TGGACTCCAG CGGCCGTCCC TTCCTGACCG AACTCCACAA CCGGTTCGAA
CGCGACGGTG CCGTCGAGGA GGAGCGGTAC CGCACCCGCA GCCTGCTGGA CTTCCAGGGC
AATGAGCGTG AGGTCGTGGA CGCCTTGGGC CGCACCACCA TGCGGTACTC CTACGACCTG
ATGGACAACC GGGTCGGTCA ACAGAGCATG GAGGCGGGGG ACCGGCTGGC CTTCAACGAC
GCCACCGGGA AACCGGTGCG GATGTGGAAC AGCCGCGGCG CCCGGTTCCG GTTCGAGTAC
GACGAGCTGC GGCGACTGGT GCGGGTCCAC GTCCGCGACC GGGAAGACGG ACCGGAGTCG
CTTCAGGAAC GCCTCGAATA CGGCGAAGAC CAACCCGACC CCGCCGAGCG AAACCTCCGC
GACCGGGTTT TCCGGCACTT CGACGCCGCC GGAATCGCGA CCAGCGACGC CTATGACTTC
AAGGGCAACC TGTTGTCCGC GACCCGGCAG CTGACCGACC AGTACCGCGG CGACCCCGAC
TGGTCGGCGG ACGTGCCGCT GTCAGAACCG TTGTACACCA ACGCAACCCA GTTCGACGCC
TTGAACCGTC CCACCGCGAT GACCGCTCCC GACCACAGTG TCATCAGCCT CGAGTACAAC
GAGGCGAACC TGCCGGACTC CATGTCGGCC CGGCTGAGCG GCGGCCAGAC CGTCACCCCG
CTGGTCACCG GCATCGACTA CGACGCCCGG GGACACCGCA CGTCGATCCG CTACGGCAAC
GGCTCCCGCA CCGAATACAC CTACGACCCG GAGAACTTCC GGCTCAGGCG GTTGCGCACG
ACGCGCGGCG ACACCGCGCT GCAAGACCTG CGCTACACCT ACGACCCGAG CGGAAACATC
ACTCACATCG CCGACGAGGC CCAGCAGGCG GTGTTCTTCC GCAACCAGCG GGTGTCGGCC
AGCAGCGACT ACCGCTACGA CGCGATGTAC CGGCTCATCG AAGCCACCGG CCGGGAACAC
CTGGGCCAGA ACGGAAAACC GTCCGACCCC CACGACACGT CACGGTCGCG ACTGGCCCAC
CCCAACGACG GCCAGGCCAT GGGCCGCTAC CGGCAGCGGT ACCGCTACGA CGCCGTGGGC
AACCTCCTGT CGATGGCGCA CAACGGCTCC GGTTCCGCCG ACTGGACCCG CCGCTACGTA
TACCTGGAAC CGAGCCTGCT GCAACCCGAG CGGTCGAGCA ATCGACTGTC CGGCACCACC
GACGCGTCGG ACGCGCCGCT GCACCGGTTC GGCTACGACG GCCACGGCAA CATCACCGGC
ATGCCCGAGC TGCCGTTCAT GGACTGGGAC GCCAGCGACC GGTTGTCGGC CGTGTCCCGG
CAGCCCGACC CGGCACCCGA CACCGCCGAA CTCACCTACT ACCGCTACGA CGCCACCGGT
GGACGGGTAC GAAAAGTCAC CCGCCGAGGC GGCCGGACCG TCGCCGAACG CATCTACATC
GGAGTATTCG AGGTGTACCG GGAGTTCGGC GACGACGGAC AGCGAACCCT CGAACGCCAG
ACCCTGCACC TGCTCGACGG CGACCAGCGC GTGGCGCTGG CCGAGACCCG CACCGAGGGC
ACCGACGACG CCCCCGAGCG GCTGCTGCGG TTCCCGCTGG CCAACCACCT CAACTCCGCC
ACCCTGGAGC TCGACGACGC GGCCCGGATC ATCTCCTATG AGGAGTACTA CCCCTACGGC
GGCACCTCGT TCCAGTCGGT GCGCAGCCAA GCCGAAACCC CCAAGCGGTA CCGCTTCAGC
GGCAAGGAAC GCGACACCGA GACCGGCTTC TACTACTTCG GAGCCCGCTA CTACGCGCCG
TGGCTGGCCC GGTGGATCAG CTGCGACCCG CAGATCGCCG ACTTCGCCGC CATCACCGGC
AGCGCCGACG AATCCCAGAC CGACGCGGAC CCCAGTCCTC CCGTGACCGG CGGCGCGGTG
AGCCTGTACG AGGCCATGGG CGGAAACCCG GTCGTCATGA CCGACCCGGA CGGCCGTCAG
ATCACCGCGT ACGAACGCTA TCTCGACAAG CAGTTCTCCA CCGTCGAAGG CGCGGAGAGC
TTCTTCAAAG CCTGGGGCAT CGGGAACACC CTGCCCGCCC AGGCACCGAA GACGTCCGGC
TCGGCAACCT CCGCGGCCCC CGCCAAACCC ACCGACACCC GGTACCGCAT CGAACTGCTC
ATCGGCGGTC CGTACAAGAA GGACGGCAAG GACCACCCCT ACGGCCATGC CGCGGTACGC
GTCGTGACCC CGGACGCCGA CACCACGTAC GACTTCGGTC GCTACGGCAA GACCTGGGGA
ACCGGAGGCT CCGAAGGGGA GGGAATGCTC AACGTGTGGA CGAACTTCGC CGCCTACATC
GCCAGCGAGA ACTCCTACGG CCGTGAGACC ACCGGCTTCA GCTTCGTCGT GACCCCGGAA
CAGGCCGCCG CCGTCACCAG CTTCTTCTCG GCCCTGACCA AGGGCCTCAA ACCGAAACTC
ACCGAGAAGA ACATGACCCG GTTCCGGCTC AGCTCCGACT ACCACGCGCT GACCTGCAAC
TGCACCACGA TCTCGCTGGA CGCGCTGGAG AAGGCGTTCC CCGGCTTCCA GTCCAAGGCG
TCGTCGTTCA ACACCGGTCG CGGCCTCGAC GGCACCGACA AGCTCGCCGT CAACTTCGCC
GGTTGGCCCA AGCACCTGTT CATGCCCGCC GACGCGAAGG CGTACCTGCA GAGCACCGAG
TTCAGCGCCC TGCTGGCCCA ATGGGGTCTC GCCGACCCGA CGGTCAACAG CTACAAGACC
GGGAAGGAAC TGCCCGCCAC GGCGCTGCCA CCGGCCAAGG CACCCGCCAC CAGCACCGCC
AAACCACCCT CGACACCACC CAAGACGCCA CGCAAACAGC CGCAGTCGCC CAGCCGACCC
TCGCAGGGCC CCAGCAAACC GCTGCGCATA CCCAAGTGGC TGCGCAAACT GGCCCGTTGA
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| Protein sequence | MPTDETPPPN GRDADGGPRS GTDSPESPST LPKAPAISAP TGGGAIRGIG EKFAANPVTG
TATTTVPIAT SPGRSGFAPS LTLGYDSGAG NGPFGLGWQL PIPTITRKTD RGLPRYRADA
PDTFILSGSE DLVPHADGPS QRELDGRGYT VRRYLPRIEG TFARIEQWHD DADGTSHWQV
ISRDNVTSRY GRTPHSRIAD PDDPSRIYSW LLCDSFDPVG NAIHYEYKSE DAAGVDLDSP
HEANRSAAAR HTQRYLKRIR YGNTVSRLLD PDLTETSWLF EVVFDYGEHD AEVPTPAEAH
PWRCRPDPFS HYRAGFEIRG YRLCQRILMF HHFPDAPGVG ADCLVRSTDL EYRHDPVGSF
VERLHQRGYR RDGDGYRAGS LPPLDFSYSR PVIDDTPRLL PEDSLRNLPI GVDGPGYQWV
DLDGEGLPGI LSWHGDSLFY KPNLGNGRFG PVRGLASQPS TGLAKDKQQL LDLAGDGQVE
LVDFGGPTPG FYERDTATAP GWRNFRAFAS LPNLDPSNPN LRFVDLTGDG LADVLITEDE
VFTWHESLGE NGFASARRHH SGADERVGPS LVFDDGTDSI HLADMSGGGL SDLVRIRNGE
VCYWPSLGYG RFGARVTMDD SPWFDEPEFF DQKRLRLADI DGTGATDLIY LHRDETRIYR
NRSGNGWEAP QGLATSFPQP QHTAQVTVAD LLGTGTACLV WSSPLPADQG RQVWYIDLLA
QGKPHLLTGM VNNLGSETYI HYAPSTKFYL DDNQAGRPWI TRLPFPVHVV ERVETVDRVS
HHRFVSRYAY HHGYFDGAER EFRGFAMVEQ WDTEAFAALS GPDADITNAD EYGYVPATRT
KTWFHTGSFE EAGRISRQLA GEYYGRDEQL LLPDTVLPEQ ELTDEELRQA HRALKGLTLR
QELYAEDGNA EADRPYQVSE QNYTLHMRQT AARGQYAVFT VNPRETITAH YERECDEPRV
AHEIVLATDD FDNILTAVSI AYGRRQADPE LTEDDAWRQR HSQLALTVNQ YTNAVAGPHD
YRAPLLWQRR VYELLGLVSL PGNRFAFDTL AAAVDGGSSR RMIAQSRTRY RRDDLSGPLP
WGELESLALP LDDYRKAFTP GLLSELYGDR VDAQLLTDNR YLRLDEDDGW WLGNGRVRYS
PAGQDEPAQE LAAARAHFFL PRRFADPFGA ETLVDYDPAD LEPTTIVDAV GNSTTAEYDF
RVLEPILVTD PNGNRTATVH DALGLVTGTA LMGKQGEQLG DLLDGFDPDL PPERVAAYLA
DPLADPHALL GNATTRLVYD QFAYLRTQQL PQPQPAVAAT LARETHASAL AEGEVTRLQL
SFTYTDGFQR EIQRKVQAEP GSDGAPRWAG TGWTVFNNKG MPIREYEPFF ATTHAFEFAR
AVGVGTVMFY DPLGRKVAVL HPDGSWEKVD FDPWRQTTWD VNDTVLLDPR TDPHVGGYLT
PYLDTLPDWR TWYRRRSEGD LGPTEQAAAS AAAVHSGTPA RIWLDSSGRP FLTELHNRFE
RDGAVEEERY RTRSLLDFQG NEREVVDALG RTTMRYSYDL MDNRVGQQSM EAGDRLAFND
ATGKPVRMWN SRGARFRFEY DELRRLVRVH VRDREDGPES LQERLEYGED QPDPAERNLR
DRVFRHFDAA GIATSDAYDF KGNLLSATRQ LTDQYRGDPD WSADVPLSEP LYTNATQFDA
LNRPTAMTAP DHSVISLEYN EANLPDSMSA RLSGGQTVTP LVTGIDYDAR GHRTSIRYGN
GSRTEYTYDP ENFRLRRLRT TRGDTALQDL RYTYDPSGNI THIADEAQQA VFFRNQRVSA
SSDYRYDAMY RLIEATGREH LGQNGKPSDP HDTSRSRLAH PNDGQAMGRY RQRYRYDAVG
NLLSMAHNGS GSADWTRRYV YLEPSLLQPE RSSNRLSGTT DASDAPLHRF GYDGHGNITG
MPELPFMDWD ASDRLSAVSR QPDPAPDTAE LTYYRYDATG GRVRKVTRRG GRTVAERIYI
GVFEVYREFG DDGQRTLERQ TLHLLDGDQR VALAETRTEG TDDAPERLLR FPLANHLNSA
TLELDDAARI ISYEEYYPYG GTSFQSVRSQ AETPKRYRFS GKERDTETGF YYFGARYYAP
WLARWISCDP QIADFAAITG SADESQTDAD PSPPVTGGAV SLYEAMGGNP VVMTDPDGRQ
ITAYERYLDK QFSTVEGAES FFKAWGIGNT LPAQAPKTSG SATSAAPAKP TDTRYRIELL
IGGPYKKDGK DHPYGHAAVR VVTPDADTTY DFGRYGKTWG TGGSEGEGML NVWTNFAAYI
ASENSYGRET TGFSFVVTPE QAAAVTSFFS ALTKGLKPKL TEKNMTRFRL SSDYHALTCN
CTTISLDALE KAFPGFQSKA SSFNTGRGLD GTDKLAVNFA GWPKHLFMPA DAKAYLQSTE
FSALLAQWGL ADPTVNSYKT GKELPATALP PAKAPATSTA KPPSTPPKTP RKQPQSPSRP
SQGPSKPLRI PKWLRKLAR
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