| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1219 |
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| Symbol | |
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| ID | 8882405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1292435 |
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| End bp | 1293337 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003510022 |
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| Protein GI | 291298744 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0289108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACG ACGTCCGTGG ACGCCCCGGT GACGAGCCGG GCGCGTCCAC GGACGTTTCG
CTTGTCCGGC TGCGGCTGGA CATCTGTTAC GACGGCACCG ATTTCGCGGG CTGGGCGTTC
CAGCCGGGGC AGCGCACCGT GGCCGGGGAG GTCTTCACGG CGCTGTCGGC GCTGTTCGGC
CAGCCCGAGG GCCTGACCGT CGCGGGCCGC ACCGACGCGG GCGTCCACGC CACCGGTCAG
GTCGCGCACG TGGACGTTCC CGCCGCCGCC TGGGCCCGCT ACCGCGACCG GCCGCTGTGG
CGGCTGCGGG GCATCCTGCC GCCCGACGTG CGCATCACGG CGATCACCGA GGTGTCGTCG
GAGTTCAACG CCCGGTTCTC GGCCCTGTCG CGCCGGTACG TGTACCGGGT CGCGGACACG
GTGTGGGGCG TGAACCCGTT GCGGCGCCTG GACACCGTGG CGTGGCCGCG TCCGGTGGAC
CTGGACGTGA TGAACGCCGC CGCGACGGTC CTGGTGGGGG AGCACGACTT CGCGGCCTTC
TGCAAACGCC GCGAGGGCGC CACGACGGTG CGGGCGCTGC GGACGGTCCG CTGGGACCGC
GACGCCGACG GCATCGCGCG CGCCACGGTC GTGGCCGACG CGTTCTGCCA CTCGATGGTG
CGCAGCCTGG TCGGGGCGAT GCTGGCCGTC GGCGAGGGCC GCCGTGACGC GGCCTGGCTG
GCGGCGCTGT TGACCCGTGG CGAACGGTCC GGCGAGGTGC TGGTGGCGCC CGCCAACGGC
CTCACGCTGG TCGAGGTCGA GTTCCCCGCC GATCCGTCGG CGTGGGCCGA GCGGCAGCTG
GAGACCCGCC GGATGCGGAC CCTGAACGGC TCGACGGCCG CGGGCCAGCA GCCCACGGCT
TGA
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| Protein sequence | MNDDVRGRPG DEPGASTDVS LVRLRLDICY DGTDFAGWAF QPGQRTVAGE VFTALSALFG
QPEGLTVAGR TDAGVHATGQ VAHVDVPAAA WARYRDRPLW RLRGILPPDV RITAITEVSS
EFNARFSALS RRYVYRVADT VWGVNPLRRL DTVAWPRPVD LDVMNAAATV LVGEHDFAAF
CKRREGATTV RALRTVRWDR DADGIARATV VADAFCHSMV RSLVGAMLAV GEGRRDAAWL
AALLTRGERS GEVLVAPANG LTLVEVEFPA DPSAWAERQL ETRRMRTLNG STAAGQQPTA
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