Gene Snas_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1115 
Symbol 
ID8882300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1186597 
End bp1188207 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509918 
Protein GI291298640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGG AGTACGCGAC GATCCGGCGC CTGGTGGGGT TGACCGATCC GCTCGGGGTG 
CTGTCGATAT ACGTCACGGT CGATCCGGCC GAGGAGGCTT CGCGGCGGCC GTCGTGGTGG
TTGCGGATCC GGAATCGGAT GGACGAGTTG CGCGCCAGTG CGAGACGGGA CGGGTCGCGG
GAGTACGAGC GGGCGCTGTT CGGCACGCTG GACCGGATCG GCGGTGACCT GGATCGACTC
GGCGACGCCG GGACCTCCGG TTTGGGGCGG GCGTTGTTCG CGCCGTTGAG CGGCGACGAG
GTGTATGAGG TCACGCTGCA ACAGCCGTTG GGGGAGGACC TGGTGGTGTG TGATCGGCGC
GCGCACGTGA AGCCGTTGCT GGCGGCGGGG ATCGCCGTGG CCGGGGGCGA CAGTCTGCGC
GTCGTCGACC ATCGCTTCGG GCGGGCCGTG GAGCTGGAGA CCATCGAGTT CTCCGAGCCC
GTTTCCGAAT GGCGCGAGAT GAAGGGGCCG CCCAACACCA ACCCGGCGCA CCCGCAGCAG
CCCGGTTCGC AGCGCGATCT GTTCGAGCAC CGGTATCTGG AGCATCAGCG CCAGTTCCTG
GCGGCCAAAC ACCACACTGT GGAGCAACAC GCGCGCGACC AGGGTTGGGA GTTCCTCGTC
GTCGCGGGTG AGCCGCAGTT GCGGGACGCG CTGTTCGACA ATCTGGCCGA CCTGCCCGGC
TGCGAGAGGA TCCGGTCCGG GCGGACCATC GGGCCCGCCA CCCCGGCCCG GATCGCCGAC
ATCGTCGCGC CCGACCTGGA TGAGGCACGG CGGCAGCGCG ACACATCGTT GGTGCGCCAG
GCGGAGGAGC GCAAGAAGGT CGCCTGGGGA CTCGACGAGA CCTTGCAGGC CGTGCAGCAG
GGACAGGCCG AGACGCTGCT GATGCGGCGC GACGGCCAAT GGCGGGCCAG CGCCACCGGG
GACGGGCAGG TGGTGCCGTC CGGGACGCTG CCGCCGGGAA CCGAACCCGG CGAGCTGACC
GAGGAACCCG ATGCCGCCGA ACGGCTCATC GAACTGGCCT TCGGCAACGG GGCCCGGGTC
GCGCTGCTGC CGCCCGACGC GTCGGCGTCC TTGGACGAGG CCGACGGACT GGCGGCGCTG
CTGCGCTGGT TACCTGGGGT TTTGGCTTCC CGGCGGGCGG GTATCCCGCT GGGAACGGAG
GTGATTTCAG TGGAACGAGG CGACACCCGG CATGGCAGGG CACTGGATGA CGACATGGCG
GCCGAGACCG ATCTGCGACC CGGCACCTCA TCGCGCGGCG ACCCGGAGTC CCCGCTGGAG
GACGAGCCCG GTGGCAACGA CCGCGACCCG CAGCGCGGCA GCGCACCGGC GGGTATGACG
ATCGCGGACG TGGAGGGCCG GTTCCAGCTG GCCAGATACG TTGACACCGG CCGGTTCCCG
GCTAGCGCCG AGGAGATCCG CACGATGGCC GTCGCCGCCA ACGCCCCCGA CCTGTTGCTG
ACCGAGCTGA CCCGGCTGCC GGAAGGCGAG TACGACACGG TCACCGAAGC CTGGCGGGCC
CTGGGACACG GGGTGGAGAC GCCGCGCACC GAGCTGGGGG ACGAGGACTG A
 
Protein sequence
MTLEYATIRR LVGLTDPLGV LSIYVTVDPA EEASRRPSWW LRIRNRMDEL RASARRDGSR 
EYERALFGTL DRIGGDLDRL GDAGTSGLGR ALFAPLSGDE VYEVTLQQPL GEDLVVCDRR
AHVKPLLAAG IAVAGGDSLR VVDHRFGRAV ELETIEFSEP VSEWREMKGP PNTNPAHPQQ
PGSQRDLFEH RYLEHQRQFL AAKHHTVEQH ARDQGWEFLV VAGEPQLRDA LFDNLADLPG
CERIRSGRTI GPATPARIAD IVAPDLDEAR RQRDTSLVRQ AEERKKVAWG LDETLQAVQQ
GQAETLLMRR DGQWRASATG DGQVVPSGTL PPGTEPGELT EEPDAAERLI ELAFGNGARV
ALLPPDASAS LDEADGLAAL LRWLPGVLAS RRAGIPLGTE VISVERGDTR HGRALDDDMA
AETDLRPGTS SRGDPESPLE DEPGGNDRDP QRGSAPAGMT IADVEGRFQL ARYVDTGRFP
ASAEEIRTMA VAANAPDLLL TELTRLPEGE YDTVTEAWRA LGHGVETPRT ELGDED