Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1088 |
Symbol | |
ID | 8882273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1156100 |
End bp | 1156723 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003509891 |
Protein GI | 291298613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAACCG TTCTGGTCTG TGTCAAGACC CCGGAATCGG CCCAGCGAAT CACCGCCAGT GCCATCCGCA TGGGCCTGGC TCAGGCGGTA CGCACGGTGC TGACCACCGA CGAAGTCCAC ATGCGCATGG CGACCACGCC CGCCGACGTC GTTCTGGTCG ACGTCGGACT GGCCCGGCCC GACCCGGTCC AGTTCACCCG TACCGTCCTG GCCCGCGCAC CACGGGCCGG AGTGGTCCTG GTGGGGGCCG TGGATCCCCG GGTCGCGGCG ATGACGGTCG CCGCCGGCGC GCGGGGGGTC GTGCGGGGCG GGGGAGAAGA GGGTGAGGAC CTGGTCGTCG CGTTGACCCA GGCCATCATG CTGATCTGCC CGCGCGCGGC GGGGCTCAAC GGGGGACAGC GCAGGGTACC GACCCAACGC GGCGGCCCGG TGGGGCTGAC CGAGCGGGAG ATGCAGGTGC TGCGGGGAAT GAGCGAGGGG AAGAGCAACG CCGAGATCGG ACGCGACCTG TTCGTCTCGG AGGACACCAT CAAGACGCAC GCGCGCCGTC TGTTCCGCAA GCTCGGCGCC CGCGACCGGG CGCACGCGGT CGCCGAAGGC TTCCGGGGAG GAATAGTCAC CTGA
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Protein sequence | MRTVLVCVKT PESAQRITAS AIRMGLAQAV RTVLTTDEVH MRMATTPADV VLVDVGLARP DPVQFTRTVL ARAPRAGVVL VGAVDPRVAA MTVAAGARGV VRGGGEEGED LVVALTQAIM LICPRAAGLN GGQRRVPTQR GGPVGLTERE MQVLRGMSEG KSNAEIGRDL FVSEDTIKTH ARRLFRKLGA RDRAHAVAEG FRGGIVT
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