Gene Snas_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0571 
Symbol 
ID8881754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp601752 
End bp603053 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content70% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003509378 
Protein GI291298100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTG TCCGTGCCTG GTTCACCGAG ACCACCGGCG GCCTCCCCCG CGCCTTCTGG 
CACTTGTGGA CGGTAACGCT CATCAACCGG CTGGGTTCCT TCGTCCTCAT CTACATGACG
CTGTACCTCA GCGTGGTCCG CGACTTCACC CCCACCACGA TCGGCATGCT CGTCGGCGCC
CAGGGTGCGG GAGCCGTCGT GGGGACCCAG CTGTCCGGGG TATTGACCGA CCGGTGGGGC
CGCCGCAAGA CACTGCTGCT GTCCAACTTC TCCTCGGTCG CGGTGCTGAC CGGGCTGGCC
TTCGTCCAGA ACGTGTGGAC CATCGGTGCC CTGCTGGCGG CGATGGGCGC CACCCTCAAC
ATGGCCCGGC CCGCGTTCTC GGCGATGATC GCCGACCTGG TCCCGCCCGC CGACCGGGTG
CGCGCCTACA CCCTCAACTA CTGGGCCATC AACCTCGGCT TCTCCGGCGC CGCGCTGTTG
GCGGGCGTCG CGGCCGGGCT GAGCTTCCAG CTGATCTTCT TCATCAACGC CGGTGCCGTG
GCGGCCTCGG GACTGCTGAT CCTGTTCAAG CTCCCCGAGA CCCGGCCCGC CCCGTCGCCG
GTTCCCGACA ACCCCGCCGG GGTCAAGCCG CGCGGTTCGA TCCGGGTCAT CGCCGCCGAC
CGGGTGTTCC TGGCCTTCGT GGGCCTGACG TTCCTGCCCG CGCTGCTGCT GATGCTGCTG
GAATCGCTGC TGCCGCTTCA GGTCACCGGT GCCGGACTCA GCCAGCAGGA GTACGGCTGG
ATCATCGCCA CCAACGGCGT GGTCATCGTG GCCGGGCAGC TGTTCATCCC CAAGCTCGTC
GACGGCAAGC GCCGCTCCCG GGTGCTGGCG GTGTCGTGTC TGTTCTGGGC CGCCGGGGTC
GGCGCCACCG GCCTGGTGGC CAGTGTCCCG ATGTTCATGC TGACGGTGCT GATCTGGACC
TTCGGCGAGA TGCTGCAGAC GCCCGCGAAC TCGGCGACGA TCGCCGACCT GTCTCCTGTG
GACATGCGCG GCCGGTACCA GTCGGTGTTC GCGCTGTCGT TCCAGGCGTC CACGATGATC
GCCCCGACGC TGGGCGGTCT GGGCCTTGAG TACCTGGGCG CGGGCCTGTG GGGCGTCGGC
GCGGTCATCG GCGTGGTGGC CGCGGTGGGT AACCTGATCG CCGAACCGGC CCGGGAACGT
CGGCTGGCCC GGCTGCTGGC TGAGGCCGAG ACGCCGGAGG TGCGGCCGGT GCGCACCGAC
CTGCCCGACG ACACCGGCGA GCTGAAAGCC GTGCGCGCCT AG
 
Protein sequence
MRTVRAWFTE TTGGLPRAFW HLWTVTLINR LGSFVLIYMT LYLSVVRDFT PTTIGMLVGA 
QGAGAVVGTQ LSGVLTDRWG RRKTLLLSNF SSVAVLTGLA FVQNVWTIGA LLAAMGATLN
MARPAFSAMI ADLVPPADRV RAYTLNYWAI NLGFSGAALL AGVAAGLSFQ LIFFINAGAV
AASGLLILFK LPETRPAPSP VPDNPAGVKP RGSIRVIAAD RVFLAFVGLT FLPALLLMLL
ESLLPLQVTG AGLSQQEYGW IIATNGVVIV AGQLFIPKLV DGKRRSRVLA VSCLFWAAGV
GATGLVASVP MFMLTVLIWT FGEMLQTPAN SATIADLSPV DMRGRYQSVF ALSFQASTMI
APTLGGLGLE YLGAGLWGVG AVIGVVAAVG NLIAEPARER RLARLLAEAE TPEVRPVRTD
LPDDTGELKA VRA