Gene Snas_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0235 
Symbol 
ID8881413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp250443 
End bp252125 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509047 
Protein GI291297769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAAA TTGACGAAAT CGCCGAGACC TACGTGGCCG AGGCGCTTGA ACTCTCCCCG 
ATGACGGCCA CCTACATGGG CGTCGAGGGA CACGATCACG AATTCGACGA CCTGTCACCG
GAGGGTCTGG CGCGCCAGGC CGCGCTGGTG CGCGACACGC TGTCCAAGCT GTCGGCCACC
GAACCGGTGG ACGAGCGGGA GCGGGTCGCC AAGGAGGGCA TGGAGGAGCG GCTCGGTCTG
GAGCTGGAGC GGCACGAGGC CGGGGACGAG TACCTGAGCC TCAACGTCAT CTCCAGCGGC
GTTCACAACG TCCGCCAGGT CTTCGACATG ATGAACACCG ACGGCCAGGA CAACGCCGCC
AACATCGCCG CCCGGCTCAA CGCGGTGCCG CAGGCGCTGC GCCAGTACAC CCAGACGCTG
CGCGAAGAGG CCGCGGCGGG ACGGGTGGCG GCGCTGCGTC AGGTCAGCGA GGTCGCCGGA
CACTGCGACA ACTGGAACGG CGCCAAGGGC GACGACTTCT GGAACGGCCT GATCGGCAAG
GTCACCGTGG ACGGCAAACC GGCCGAGGGC GCGCTGGCCG AGGCACTGGG TTCCGGTGCC
GCCGCGGCCC GCGCCGCCAC CGCCGAGTTC GCGAGCTTCC TGCGCGAGGA GCTGGCGCCC
AAGGCCCCGT CGAAGGACGC CGTCGGCCGG GACGCCTACT CGCGCGGTTC CCGCTACTTC
CTCGGCGCGG CGGTCGACCT GGAGGAGACC TACGCGTGGG GTTGGCAGGA GCTGCACCGC
ATCGAGACCG AGATGGCCGC GGTCGCCAAC CAGATCAAAC CGGGCGCGAC CGTCGACGAG
GCGGTGGCGA TCCTGGACGC CGACCCGGCC CGCAGCATCA GCGACAAGCA CGAGTTCCGT
GACTGGATGC AGCAGCTGGC CGACGCCACC GTCGCCGACA TGGCCGACAA GCACTTCGAC
ATCCCGGAAC CGGTGCGCGC CATCGAGTGC ATGATCGCGC CCACCGCCGA CGGGGCGATC
TACTACACGC CGCCCAGCGA GGACTTCTCG CGTCCGGGCC GGATGTGGTG GTCGGTGCCC
GACGGCCAGG ACCACTTCGC CAAGTGGCGC GAGGTCACCA CGGTCTACCA CGAGGGCGTC
CCCGGACACC ACCTCCAGAT CGGACAGACG GCCTACCGTT CCGAACTGCT CAACCGCTAC
CAACGCCAGA TGCTGTGGTG CTCGGGCCAC GGCGAGGGCT GGGCGCTGTA CTCCGAGCGG
CTCATGGACG ACCTCGGTTA CCTGGCCGAC CCCGGCGACA AGCTGGGCAT GCTGGACGGC
CAGGCTTTCC GGGCCACCCG CGTCATCGTC GACATCGGCG TCCACCTGGA GCTGGAGATC
CCGGCCGACA ACCCGTTCGG GTTCCGTCCG GGTCAGCGCT GGAACGCCGA GCTGGCCTGG
GAGTTCCTGC GGGCTCACTG CCGCATCGAG GAGGAGATGC TGAAGTTCGA GCTGAACCGC
TACCTGGGTT GGCCCGGTCA GGCACCGTCC TATAAGGTCG GTGAGCGGAT CTGGCTCGCG
GCCCGCGAGG ACTACAAGCG CCGCAAGGGT GCCGAGTTCA ATCTCAAGCA GTTCCACACC
GACGCGCTGA ACCTCGGCGC GTTGGGGCTG GAGCCCTTCC AGGCCGCTTT GGCTAGGCTG
TAA
 
Protein sequence
MRQIDEIAET YVAEALELSP MTATYMGVEG HDHEFDDLSP EGLARQAALV RDTLSKLSAT 
EPVDERERVA KEGMEERLGL ELERHEAGDE YLSLNVISSG VHNVRQVFDM MNTDGQDNAA
NIAARLNAVP QALRQYTQTL REEAAAGRVA ALRQVSEVAG HCDNWNGAKG DDFWNGLIGK
VTVDGKPAEG ALAEALGSGA AAARAATAEF ASFLREELAP KAPSKDAVGR DAYSRGSRYF
LGAAVDLEET YAWGWQELHR IETEMAAVAN QIKPGATVDE AVAILDADPA RSISDKHEFR
DWMQQLADAT VADMADKHFD IPEPVRAIEC MIAPTADGAI YYTPPSEDFS RPGRMWWSVP
DGQDHFAKWR EVTTVYHEGV PGHHLQIGQT AYRSELLNRY QRQMLWCSGH GEGWALYSER
LMDDLGYLAD PGDKLGMLDG QAFRATRVIV DIGVHLELEI PADNPFGFRP GQRWNAELAW
EFLRAHCRIE EEMLKFELNR YLGWPGQAPS YKVGERIWLA AREDYKRRKG AEFNLKQFHT
DALNLGALGL EPFQAALARL