Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6353 |
Symbol | |
ID | 5320656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 19998 |
End bp | 20555 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640777946 |
Product | cytochrome c class I |
Protein accession | YP_001314878 |
Protein GI | 150378284 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.708608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGCC TGCTGGCAAT AGCGGCGGCA ATCGCCGTGC TCAGCGCCTG CGAGCGGGAG GAGCGTGAAT TTCGTCCGCC GCCCATCGGG ACCGAAGGCG AGGCGCCGAT CACGCTCTCC AGCATTTCGC CTGGTACCGA GCCGCCCGAG CGGCCGGCGG ATACGGGCAA GGCGTATGAA GAAAACTCCT ACCATCTCAG CGAGGGCAAG CGGCTCTTCA CCTGGTTCAA TTGCAACGGT TGTCACGCCA ATGGCGGCGG CGGTTCCGGC CCGGCGCTGA TGGACGACAG CTGGATCTAT GGCGGTGCAC TCCGGAACAT CGTCCAGACG ATCCGCGAAG GACGCCCGAA CGGAATGCCG TCGTTCCGAG GCACAATTCC CGAGGAGCAG ATAACGCAGA TCGCCGCTTA TGTGCGCTCG ATGGAGCGCC AGGTCCCGCA AGACGCTGCA CCCGGTCGCA ACGACGATCT GATGCCGCGG CCGTCGGAGC ACCGCTTGCC GGCCTCGCCC GCGGTGCCCG GCGGCACTGT TCCGCCATCC GGCCAGGCGC CGCAGTGA
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Protein sequence | MRRLLAIAAA IAVLSACERE EREFRPPPIG TEGEAPITLS SISPGTEPPE RPADTGKAYE ENSYHLSEGK RLFTWFNCNG CHANGGGGSG PALMDDSWIY GGALRNIVQT IREGRPNGMP SFRGTIPEEQ ITQIAAYVRS MERQVPQDAA PGRNDDLMPR PSEHRLPASP AVPGGTVPPS GQAPQ
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