Gene Smed_6353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6353 
Symbol 
ID5320656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp19998 
End bp20555 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content67% 
IMG OID640777946 
Productcytochrome c class I 
Protein accessionYP_001314878 
Protein GI150378284 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.708608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGCC TGCTGGCAAT AGCGGCGGCA ATCGCCGTGC TCAGCGCCTG CGAGCGGGAG 
GAGCGTGAAT TTCGTCCGCC GCCCATCGGG ACCGAAGGCG AGGCGCCGAT CACGCTCTCC
AGCATTTCGC CTGGTACCGA GCCGCCCGAG CGGCCGGCGG ATACGGGCAA GGCGTATGAA
GAAAACTCCT ACCATCTCAG CGAGGGCAAG CGGCTCTTCA CCTGGTTCAA TTGCAACGGT
TGTCACGCCA ATGGCGGCGG CGGTTCCGGC CCGGCGCTGA TGGACGACAG CTGGATCTAT
GGCGGTGCAC TCCGGAACAT CGTCCAGACG ATCCGCGAAG GACGCCCGAA CGGAATGCCG
TCGTTCCGAG GCACAATTCC CGAGGAGCAG ATAACGCAGA TCGCCGCTTA TGTGCGCTCG
ATGGAGCGCC AGGTCCCGCA AGACGCTGCA CCCGGTCGCA ACGACGATCT GATGCCGCGG
CCGTCGGAGC ACCGCTTGCC GGCCTCGCCC GCGGTGCCCG GCGGCACTGT TCCGCCATCC
GGCCAGGCGC CGCAGTGA
 
Protein sequence
MRRLLAIAAA IAVLSACERE EREFRPPPIG TEGEAPITLS SISPGTEPPE RPADTGKAYE 
ENSYHLSEGK RLFTWFNCNG CHANGGGGSG PALMDDSWIY GGALRNIVQT IREGRPNGMP
SFRGTIPEEQ ITQIAAYVRS MERQVPQDAA PGRNDDLMPR PSEHRLPASP AVPGGTVPPS
GQAPQ