Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5906 |
Symbol | |
ID | 5320208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 871648 |
End bp | 872130 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640777601 |
Product | putative tricarboxylic transport membrane protein |
Protein accession | YP_001314533 |
Protein GI | 150377938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.896471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.308497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGC TCGCGGCACG CCCACAGCTC GTCATCGTCT CCCTGATCGT GCTGGCGGTC GGGGCGGCGG TCATGTGGAC TGCGACGACG ATACCGGTCG GACCCGGCGT CGCCGCCGTG GGCCCGCGGT CGTTTCCCTT CGGCGTCGGG CTGCTTCTCA TTGCCTGCGG CCTGCTGCTT CTGCTGGAGG CGAGCCGCGC GCCCTGGGAC TGCGAAGCGA CCGATCCCGC AGCACCCGGT CTCGATCTCG TACCGCTCGG CATTCTGGCC TGCGGCATGA TCGTGAACGT CCTGCTCATC AAGAGCGCGG GTTTCATTCT CGCATCGACG CTGATGTTCG CCTTCACGGC AAGGGCCTTC GGTGCGCGCC GCCTCTGGCT GTCGGTGCTG ATCGGTTTCG CACTCGCCCT TGCCACCTAT TACGGCTTTG CCCGCATGCT TGATCTGAGG ATTGGCGGCG GCTTCATCGA GGACTTGTTC TGA
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Protein sequence | MKALAARPQL VIVSLIVLAV GAAVMWTATT IPVGPGVAAV GPRSFPFGVG LLLIACGLLL LLEASRAPWD CEATDPAAPG LDLVPLGILA CGMIVNVLLI KSAGFILAST LMFAFTARAF GARRLWLSVL IGFALALATY YGFARMLDLR IGGGFIEDLF
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