| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5827 |
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| Symbol | |
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| ID | 5320129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 793149 |
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| End bp | 794099 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777523 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001314455 |
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| Protein GI | 150377860 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.112164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.283627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGC CTTCCGCCAG CGAACCTGCC GAAAGCTCTC CGGCTGAGAC AATCGACGCA
CATCGGCACG AGATGCTCGA TGTTAACCGG AATCCCGCGA ACGAAATGTC ACGCGTTCTC
GGGACTGAGC CGGTCCATCT AGCGGCAGAC CCGTCCGGCG GCGCAATCGC CCATTGGCAT
CACGACGCCT TGCATGACGT CGTCGAGCCT ATGACCGATC ACGTCATCAT GGCTTATAAC
GGCGCGATAC AACGCATGGA AAGGCGGTCC GGAAGATCGA TCGAGAGCGG AACGTTTCGT
CGCGGGGTGG TGATCATCAT TCCAGCTGGG TCAAGCTCCC GCTGGGATAT TCCAAAGCCG
GTGGATGTCG TGCAGCTCTA TCTTCCCCAC GCGACACTGA CGCGCATTGC CGACGAAACC
GATACATTCA CTCCGACCGA CCTCCTGGAG CGAACCGCGC ATCCGGACCA CATTACATCC
CGATTGCTCC TGAGTGCGGC CGATGTCTTA GAAGGCAATA CGGCACTGGA TACACTGTTC
AGGCAGCAGT TGACCGACCT TCTGGCCACG CGCCTGCTGG CTGCGCACAC TGGCAGGGCG
CCGAGCTATC GGCCGGCGGT CGGCGGCCTC GCGCCGAGCG TTCTGCGCAG GGCCGTCGAA
CGATTACGGT CGGACGCGGA CGCCGACGTC TCCCTTGCGG CCCTTGCTGC CGATTCCGGG
CTGTCGCGGT TTCATTTCTG TCGGGCCTTC AAGGAAAGCA CGGGGCTTTC ACCTCACAAC
TGGCTGCGTC AATATCGACT CGAGCAGGCC ATAAACATGC TACGTGATCC TCAACAATCG
ATCGCGTTGG TCGCAGCTTC CCTCGGGTAT GCCTCGCAAA CTGCATTTGC AGCTGCGTTC
CGCAAATTGA CCGGTGAAAC ACCGACAGAT TGGCGCCGCC GCCACGGCTG A
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| Protein sequence | MSLPSASEPA ESSPAETIDA HRHEMLDVNR NPANEMSRVL GTEPVHLAAD PSGGAIAHWH
HDALHDVVEP MTDHVIMAYN GAIQRMERRS GRSIESGTFR RGVVIIIPAG SSSRWDIPKP
VDVVQLYLPH ATLTRIADET DTFTPTDLLE RTAHPDHITS RLLLSAADVL EGNTALDTLF
RQQLTDLLAT RLLAAHTGRA PSYRPAVGGL APSVLRRAVE RLRSDADADV SLAALAADSG
LSRFHFCRAF KESTGLSPHN WLRQYRLEQA INMLRDPQQS IALVAASLGY ASQTAFAAAF
RKLTGETPTD WRRRHG
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