Gene Smed_5807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5807 
Symbol 
ID5320109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp778017 
End bp778292 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content62% 
IMG OID640777508 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_001314440 
Protein GI150377845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.600163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0888575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCG TTAGCGAAAG GCCCGTCAAA CGTTCGATCC GGAGGAACGA GCTGCGAGAA 
ATCGTTCCTC TGGCGGACAG CACCATTTAC GAGATGGAGC AGCGCGGAGA ATTTCCACGC
CGCTTTGGCC TTTCACCCAG ATGCGTCTGG GATCTTGCCG AGGTCGAGGC GTGGCTCGAA
AGCCCGCGCA CGCGGCCAAT CCCGCGCGCC AAACACCCCG ACGTCACCCA GCGGAAGTTC
CGGCCGGTCA AAGGGCAGGG TCGGGCTCAA GCATAG
 
Protein sequence
MPSVSERPVK RSIRRNELRE IVPLADSTIY EMEQRGEFPR RFGLSPRCVW DLAEVEAWLE 
SPRTRPIPRA KHPDVTQRKF RPVKGQGRAQ A