| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5762 |
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| Symbol | |
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| ID | 5320064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 730053 |
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| End bp | 731315 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640777471 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001314403 |
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| Protein GI | 150377808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3900] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA CACAAATTGC GGTTCTCGAA GACAAAAAAT ACGACCTGCG CTGGCGAAAG
ATTGGTCGAA ATGCATCGCT ACATGCGGGC GTTGTTCGAA AACTGCTCAT GGCGGGCGCC
CTTTTGGCAG GCACAAATAC CCCGTCTTGG TCGCAAAGTA TGACAGACCC GGTCAATCGG
TACAGCAAGG AATCCATGCA GCAGGCCTTG CAGACCAGGG AGCAGTACGA TGTCCATGGC
CTGAGCTTCG ACACCGGCCA GTCAACATTA CAACCAAGTG CGAAGCCGCT TCTCGATGAT
ATAGCGACCG CGCTCAAGAA CTTCCCTGAT TGGGGCTTGA GAATTGTCGG CCACACCGAC
GCAAGCGGCA GTGCAGAAAG CAACGAACGT CTTTCACTTG AGCGTGCCGA CACGATCAAG
GCGGCGCTGG TCGAACGAGG GATCGATGCC GGCAAGTTAC TGGCGGCGGG CGCTGGGCAA
AACCGGCCGA TCGCCAGCAA TGAGACGGAT GAAGGAAGAG CTCTCAACCG GCGTGTTGAG
CTCATGAGGT TCACCGACTC GGCCGAAGCC AAGAAGCTGC TCAAGGCCAT GTCCGATTAT
CTAGCAGCCC AGAAGGCGAT ATCGTTCGAG TACGATGCCA ATCTACAGGT TGTCACCAAC
AGTGATCAAA AACTCGGGCT GGCGAGTTCA GGGACTGTGA GCCTTAGCCG GCCGGACAAG
GTGCACACGA CCCGTTCCGG CGGCTTTGTC GATGTAGAGT CCCTTTTCGA TGGTAAGACG
CTCACTCTTC TCGGAAAGAA CGTCAATAAG TACACACAAG TCGAAATCCC CGGCACGGTC
GATCATCTTG TAGACGAGTT GAAGGACAAG TATGGATTGC CCTTGCCTGC CGCCGACTTG
TTGTTGACCA ATGCATATGA CGAGCTGGTC CAGGGTGTTT ACGATTCGAA AGACCTGGGG
AGCGGCGTCA TCAATGGTGC CGAGTGTGAT TCGCTCGCCT TCCGCAAGGA CGATGTGGAT
TTCCAGATCT GGGTCGCCCA AGGAGCACAA CCTCACCCCT GCCGCTTGGT CATTACTTCC
AGATTGGTCA AGGGTGGACC GGAATACAGC GTCCAGATCA GGAATTGGAA GTCTGGGGAT
GGGGTTATGC CGGGTGATTT TAGCTTCAAG AACTCGACGA ATGCCGAAAA GATCGATGTG
AACGACCTGA AGGGTAGCCT AGGCGAATTG CCGGAGAATT TTGTGGGAGG AGAGGGGAAA
TGA
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| Protein sequence | MSNTQIAVLE DKKYDLRWRK IGRNASLHAG VVRKLLMAGA LLAGTNTPSW SQSMTDPVNR
YSKESMQQAL QTREQYDVHG LSFDTGQSTL QPSAKPLLDD IATALKNFPD WGLRIVGHTD
ASGSAESNER LSLERADTIK AALVERGIDA GKLLAAGAGQ NRPIASNETD EGRALNRRVE
LMRFTDSAEA KKLLKAMSDY LAAQKAISFE YDANLQVVTN SDQKLGLASS GTVSLSRPDK
VHTTRSGGFV DVESLFDGKT LTLLGKNVNK YTQVEIPGTV DHLVDELKDK YGLPLPAADL
LLTNAYDELV QGVYDSKDLG SGVINGAECD SLAFRKDDVD FQIWVAQGAQ PHPCRLVITS
RLVKGGPEYS VQIRNWKSGD GVMPGDFSFK NSTNAEKIDV NDLKGSLGEL PENFVGGEGK
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