Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5678 |
Symbol | |
ID | 5319980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 644804 |
End bp | 645076 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640777408 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001314340 |
Protein GI | 150377745 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03070] transcriptional regulator, y4mF family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.669501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGGT CCGCACGCGA TTTCGGCGAT GCCGTCAGGG AGAAACGGAA AGTCCTCGGC TGGACCCAGG CAGAGCTTGC CACCCGTTCG GGTACGGGTG AACGTTTCAT CGTCGAGCTC GAATCTGGCA AAAGAAGCTG CCAGCTCGAA AAAGCTCTGA TCGTTGCACG AACAGTCGGC ATCGAGATCG GCGACCTCAA AACAGCCCAA GCGCCTTCAG CTGCGTTGGA CGATGACCTC GGCTTCCTGC CGACCTTCGG GGATGGTCGA TGA
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Protein sequence | MFRSARDFGD AVREKRKVLG WTQAELATRS GTGERFIVEL ESGKRSCQLE KALIVARTVG IEIGDLKTAQ APSAALDDDL GFLPTFGDGR
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