Gene Smed_5597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5597 
Symbol 
ID5319899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp564661 
End bp565497 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID640777342 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001314274 
Protein GI150377679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.835638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAA ATCAGATCGA ACTCACCGTC TTCGGTCCCG AGTATCTGGA AGCTGCCGTC 
AGGCTCTCGC GGCAGGCCGG CTGGCCACAT CGCCTGGAGG ATTGGCAGAT GGCGCTCGCC
TTGAGTGCAG GCGTGGTGGC TATTGAGGAT GCCCGAGTTG TCGGCACTGT GCTCGTCACG
CCCTATGAGG CGGACTGCGC GACCATCAAC ATGGTCATCG TCGACGAGAC GGTGCGCGGT
CGCGGCCTCG GCCGCAAGCT GATGGACGCC GCATTCCAGA TCGCCGGCGA CCGGCCGCTC
CGGCTGGCGG CGACAACCGA AGGCCGGCCG CTCTATGAAA AGCTCGGTTT TGGCGAGAGC
GATGCCGTCC TCCAACATCA GGGCGTAGTC GGAGAGATCG CCGCACCGGC CGAAACGGAG
GCTGCAAGCA CTGACGACGT TGAAGCGATC GCCAAGCTCG ACCGCCTTGC CTTCGGCGCC
GACCGTGGAG GATTGATTGA CTATCTCGCC AAGGTGGGCG AGTTCGCCGT CCTTCGCCGC
GACTGCCGCG TCACCGGGTT TGCCGCGCTG CGTGCCTTCG GTCGTGGCGA GGTCATCGGC
CCCGTGGTCG CCGCCAACCT CGACGATGCC AAGGCACTCG TCGCCCATTT CATCGCCGCG
CGGCCGGGCC GGTTGCTCCG CGTCGATACG ACTGCCGGCA CCGACCTTTC CCCTTGGCTC
GCGGCACAGG GGCTCGCTCA TGTCGGCGGC GGCATCGCCA TGATGAAGCC GTTGATCCGC
CGATCCGTCC ATTCCATCGC TCATACCTTT GCCCTCGCCA ACCAGGCGCT TGGCTGA
 
Protein sequence
MQTNQIELTV FGPEYLEAAV RLSRQAGWPH RLEDWQMALA LSAGVVAIED ARVVGTVLVT 
PYEADCATIN MVIVDETVRG RGLGRKLMDA AFQIAGDRPL RLAATTEGRP LYEKLGFGES
DAVLQHQGVV GEIAAPAETE AASTDDVEAI AKLDRLAFGA DRGGLIDYLA KVGEFAVLRR
DCRVTGFAAL RAFGRGEVIG PVVAANLDDA KALVAHFIAA RPGRLLRVDT TAGTDLSPWL
AAQGLAHVGG GIAMMKPLIR RSVHSIAHTF ALANQALG