| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5582 |
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| Symbol | |
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| ID | 5319884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 548777 |
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| End bp | 550051 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777329 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001314261 |
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| Protein GI | 150377666 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.152115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.231128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATT GGTTTAAACT TACGAAGGCA GTGCTTTTGG CGGGAGGTCT CATGACCTCC
GTCGCCCACG CCGAGGAGAC CGTCACATGG TGGGACTTCT TCGGCGGCGG TGACGGCGTT
CGCATGAAAC AATTGGTCGC CGATTTCAAC GAGGCCCACA AGGGCAAGAT TAAGATCGAT
GCGACCACGC TGGAATGGGG AACGCCATTT TATTCCAAGG TCCAAACCTC TGCGGCGGTT
GGCGAAGCCC CTGATATCAT GACGTATCAC GCCAGCCGCA TCCCGCTAGC GGTGAAGCAG
GGCATTCTGC AGGAAATCAC CGCCGACGAC TGGAAGACGA TGGGCCTCGG ACGATCTGAC
TACGCCCCCG CGACTTGGGA GGCTGTGAGC ATCGACGGCA AACAGTATGC GGTGCCGCTC
GATACACACC CAATCGTCCT TTATTATAAC AAGGACCTGC TCAAGAAAGC CGGAGTGCTC
GGCGACGACG GCAAGCCGAA GGGCATGGAC TCGCGTGAGA ACTTCACCGC GACGCTGAAG
GCCTTGAAGG CCGCTGGGGT CAAGTTCCCG CTTGGCTCGG TGACTGCGGA CGGCAACTTC
ATGTTCCGCA CCGTCTATTC CTTCATGGGC CAGCAGGATG GTGAGCTCAT GACGGACGGT
GAGTTTCTTG CTGGCGACAG CGCAAAGAAG CTCGAAAACT CTCTTGCCGT TCTGTCCGAA
TGGACGAAGG AAGGGCTTCA ATCCACCTAT ACCGACTACC CTGCGACCGT GGCGCTCTTC
ACATCGGGTG AAGCTGCGAT GATGATCAAC GGGGTTTGGG AAGTCCCCAC TATGACGGAC
CTCAAGAACA ACGGCAAGCT CTTCGAATGG GGAGCCGTCG AACTCCCTGT AATCTTCGAT
CATCCCTCCA CCTACGCCGA CAGTCACACC TTCGCACTCC CTGCCAACAA GGGCGAGGAG
ATGAGTCCCG AGAAGCGCGC CGCGGTCCTC GAGGTCATGA GCTGGATGTC AAAGAATTCG
TTGTTCTGGG CGACCGCGGG GCATATCCCC GCATATGGTC CGGTCACGAA CTCGGCCGAG
TACAAGGCGA TGGAGCCGAA CCACACATAT TCTTCGCTCA CCGCGAACAT CATCTTCGAT
CCCAAGACTC CGCTGGCGGG CATCGCTGGG CCAATTTTTG ACGTGATGTC GAATTTCTTC
GTGCCGACGC TCAATGGTGA AATGGAGCCC GCGAAAGCGG TCGAGGAGAT CAAGGCCGGT
TTGGCCGAGC TTTGA
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| Protein sequence | MPNWFKLTKA VLLAGGLMTS VAHAEETVTW WDFFGGGDGV RMKQLVADFN EAHKGKIKID
ATTLEWGTPF YSKVQTSAAV GEAPDIMTYH ASRIPLAVKQ GILQEITADD WKTMGLGRSD
YAPATWEAVS IDGKQYAVPL DTHPIVLYYN KDLLKKAGVL GDDGKPKGMD SRENFTATLK
ALKAAGVKFP LGSVTADGNF MFRTVYSFMG QQDGELMTDG EFLAGDSAKK LENSLAVLSE
WTKEGLQSTY TDYPATVALF TSGEAAMMIN GVWEVPTMTD LKNNGKLFEW GAVELPVIFD
HPSTYADSHT FALPANKGEE MSPEKRAAVL EVMSWMSKNS LFWATAGHIP AYGPVTNSAE
YKAMEPNHTY SSLTANIIFD PKTPLAGIAG PIFDVMSNFF VPTLNGEMEP AKAVEEIKAG
LAEL
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