| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5437 |
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| Symbol | |
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| ID | 5319739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 395591 |
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| End bp | 398272 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640777200 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001314132 |
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| Protein GI | 150377537 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.463119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGC ATCCAGGCTT TCCCAACGAT CCGCACACCG TTCTCGACCC TTCGATCCGA
TGGTTTCCGG CCGACGAGGC AATGCGCGAA ACCAGCATGG ACAAGCTTAT GCCGCCGCTC
GTGGCGGCGC TGCGCCAGAA GGTGAAAGAC TTCCGTGACG GCGGTTATGT CGGCGCGACC
GATACCAGCC GGAGCCTGCT CAATTGGTGG TTCAATACGC CCCACCTAAT CCCCCAGACT
GACGGCAACA TGACTGAGTT TCAGTATTTC TTCGCACAGA GGGAATCCCT GGAAACCATT
ATCTATCTTT ATGATGTTGT CGGCGTGAAC GACAAATTCG ACCTAATGCG CTTCGACAGT
AGCGGGGCCG TTTCCGCCAA CATGTTCGAT GAAACATGGC GTCGTTTCGT TGTGAAAATG
GCGACAGGGG CGGGGAAAAC CAAGGTGCTT AGTCTGGCCC TGGCATGGAG CTTCTACCAC
AAGCTCTACG AGCCCGACTC CCGGCTGGCC CGCAACTTCC TTGTGATTGC ACCTAACATC
ATCGTGCTGG ACCGCATCTA TAAGGACTTC CAGGGACTGC GGTTGTTTTT CGACGACCCG
GTTATCCCCG ATAACGGCTT TGATGGCCGT AACTGGCGCG ATGATTTCCA GTTGACGCTG
CATGTGCAGG ACGAGGTGCG TATCACGCAT CCGACCGGCA ACATCTTTCT CACCAACATT
CACCGGGTTT ATGGAGGCGA GGACATCCCT GCATCGCCAG AAGACGACAA CTCGATGGAT
TATTTCCTTG GCACCCGACC GACCGGCGCG ACGACGGATT CCCAGGTGGA CCTCGGTATG
ATCGTCCGTG ACATCGATGA ACTGATGGTG CTCAACGACG AGGCCCATCA CATTCACGAC
TCGCGGCTCG CATGGTTCAA GTCGATTGAG GACATCCACA ACCGACTGTT GCAAAAAGGG
TCTGCCCTAT CGCTACAAGT AGACGTGACG GCGACCCCGA AGCACAACAA CGGCGCGATC
TTCGTGCAGA CCGTGGCCGA TTATCCGCTA GTCGAAGCCA TTTCGCAGAA TGTCGTGAAG
CATCCCGTGC TGCCAGACGC TGCCAGCCGA GCCAAGTTGT CCGAGCGACA GAGCGCCAAA
TACACCGAGA AACACGCTGA CTATATTGAC CTCGGGGTGA TCGAATGGCG CAAGGCCTAT
GCCGAACACG AGAAGGTGGG CAAGAAAGCC ATCCTGTTCA TCATGACTGA CGACACGCGC
AACTGCGATG ATGTTGCGGA CTATCTTGAA GGCAACTACG CCGATCTCAA AGGCGCAGTG
CTAGTCATTC ACACCAAAGC CAACGGCGAA ATCTCCGAAT CCACCTCAGG CAAGGCCAAG
GAAGAACTGG AAAAGCTCAG GAAGCAGGCG AACGAGATCG ATGACGCCGC CAGCCCCTAC
AAGGCCATTG TATCGGTCCT GATGCTGAAA GAGGGGTGGG ACGTACGGAA TGTGACTACC
ATTGTCGGAC TACGGGCCTA TACCTCGAAG AGCAACATTC TCCCCGAACA GACGCTGGGG
CGTGGCCTCC GCAAGATGTA TCCTGGTGGC ATCGAAGAGT ATGTCAGTGT TGTTGGCACC
GACGCCTTTA TGGAGTTTGT CGAGTCCATC CAAGCCGAGG GCGTCGAGCT TGAGCGCCAG
GCGATGGGCC AGGGGACGAA GCCGAAGACC CCCCTCGTGA TAGAGGTGGA GAAAGACAAC
GAGAAGAAGG ACATAGATGC CCTAGATATC GAGATTCCGG TGATGACCCC ACGGAGCTAC
CGCGAGTACA AGTCACTGGG CGACCTTGAT ATAACGGCCT TTGCCCATCA GCGCGTTCCT
TACCGAACTT TCAGCGAGGA GCAACAGCGC GAGATTGTGT TCAAGGACAT CACGACTGGC
GCGATAACGC ACACCACCAT ACTCGACACG GCAGGAATTG CCGATTACCG CAGCGTCCTG
GGGTATTTCG CCCAGACCGT CATGAAGGAA TTGCGGCTGA TCAGCGGCTA CGACATTCTT
TACGGGAAAA TCAAAGCCTT CGTGCAGTCG GAATTGTTTG ACTGCGAAGT TGACCTCGAC
AGCGCCAACA CCTTGCGGAA TCTATCCGAA TTGTCCGCGA CGAAAACGCT TATCGAAAAT
TTCAAGAAAG CCATCAACGC CCTAACGGTA AAGGACAAGG GCGACGCGGA AATCCGCGAC
ACTATTAAGC TGCGGCAGAC CCGGCCCTTC GTGACAAAGG AGCAGGGCTA TCTAGTGCCG
AAGAAAAGCG TCTTCAACCG GATTATTGGC GACAGCCATC TTGAACTAAT TTTTGCCAGT
TTCCTTGAGT CCTGCTCCGA TGTGGTTGCT TATGGAAAGA ACTACCTCGC AGTGCATTTT
AAGATTGATT ACGTCAACGC CGAAGGGAAT ATCTCCAACT ACTATCCCGA CTTTCTGGTG
AAGCTACCTG ACAAGCGGAC TGTGATCGTT GAAACCAAGG GTCTTGAGGA CTCAGACGTA
CCGCTGAAGA TGGAGCGTCT GAAGCAATGG TGCGAGGATA TCAATCGGGT GCAGGCCGAC
GTAACCTATG ATTTTGTTTA CGTTGACCAG GAAAGCTTTG AAAAATACAG TCCGAAGTCA
TTTTCGGAGC TTGTTGAGAA TTTCACACAA TACAAGGTGT GA
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| Protein sequence | MALHPGFPND PHTVLDPSIR WFPADEAMRE TSMDKLMPPL VAALRQKVKD FRDGGYVGAT
DTSRSLLNWW FNTPHLIPQT DGNMTEFQYF FAQRESLETI IYLYDVVGVN DKFDLMRFDS
SGAVSANMFD ETWRRFVVKM ATGAGKTKVL SLALAWSFYH KLYEPDSRLA RNFLVIAPNI
IVLDRIYKDF QGLRLFFDDP VIPDNGFDGR NWRDDFQLTL HVQDEVRITH PTGNIFLTNI
HRVYGGEDIP ASPEDDNSMD YFLGTRPTGA TTDSQVDLGM IVRDIDELMV LNDEAHHIHD
SRLAWFKSIE DIHNRLLQKG SALSLQVDVT ATPKHNNGAI FVQTVADYPL VEAISQNVVK
HPVLPDAASR AKLSERQSAK YTEKHADYID LGVIEWRKAY AEHEKVGKKA ILFIMTDDTR
NCDDVADYLE GNYADLKGAV LVIHTKANGE ISESTSGKAK EELEKLRKQA NEIDDAASPY
KAIVSVLMLK EGWDVRNVTT IVGLRAYTSK SNILPEQTLG RGLRKMYPGG IEEYVSVVGT
DAFMEFVESI QAEGVELERQ AMGQGTKPKT PLVIEVEKDN EKKDIDALDI EIPVMTPRSY
REYKSLGDLD ITAFAHQRVP YRTFSEEQQR EIVFKDITTG AITHTTILDT AGIADYRSVL
GYFAQTVMKE LRLISGYDIL YGKIKAFVQS ELFDCEVDLD SANTLRNLSE LSATKTLIEN
FKKAINALTV KDKGDAEIRD TIKLRQTRPF VTKEQGYLVP KKSVFNRIIG DSHLELIFAS
FLESCSDVVA YGKNYLAVHF KIDYVNAEGN ISNYYPDFLV KLPDKRTVIV ETKGLEDSDV
PLKMERLKQW CEDINRVQAD VTYDFVYVDQ ESFEKYSPKS FSELVENFTQ YKV
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