| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5243 |
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| Symbol | |
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| ID | 5319545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 205705 |
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| End bp | 206442 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777020 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313952 |
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| Protein GI | 150377357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.7504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.303485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGACCC CCAATCTTCT CGAATTGCAC AACATCTCGA AGAGTTTCGG TGCGCTGACC
GCGCTTCGCA ATCTGAGCTT CCACATTGGT GAGGGTGAAG TCGTGGGGCT TTTGGGCGAC
AACGGCGCCG GCAAGTCGAC CACCGTCAAT CTCATCTCCG GCATCCACAA GCCGACGGAC
GGCTATCTCA GCGTCGACGG CAAGAAGACG ACCTTCACCT GCCGCTCGGA TTCCGCCGAT
GCAGGCATCG AAACGATCTA CCAGCACACC GCGCTGGTCG ATTCCCTCTC GATTACCCGC
AATATCTTCA TGGGCCGTGA GCTGGCCGAT CGCCTCGGCT TCCTCAGACA GCGCGAGATG
CGCGACATCG CCATGGAAGT CTTGCAAAAC GCCGTCCACA TCTCCGGCAT CGATTCCCCG
GATACGCTCG TCGGCAATCT TTCTGGCGGG CAGAAACAGG CGGTCGCAAT TGCCCGCGCC
GTCCACTTCA AGAAGCGCGT GCTACTCCTC GATGAGCCGA CCTCGGCGCT CTCCGTACGC
GAGACGGAAG CGCTGCTGAA CCAGGTGCTG AAGCTCAAGG CGGAGAATGT GTCGAGCGTG
CTGGTGACTC ACAATCTCTA CCACGCCTAT CAGGTCTGCG ACAGGTTCGT GATCATGAGC
CATGGCACGA AGGTCTTCGA CGTGCAAAAG GCCGATACGA CGATCAGCCA GCTAACCGAA
TATGTCGTGC TCACCTGA
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| Protein sequence | MSTPNLLELH NISKSFGALT ALRNLSFHIG EGEVVGLLGD NGAGKSTTVN LISGIHKPTD
GYLSVDGKKT TFTCRSDSAD AGIETIYQHT ALVDSLSITR NIFMGRELAD RLGFLRQREM
RDIAMEVLQN AVHISGIDSP DTLVGNLSGG QKQAVAIARA VHFKKRVLLL DEPTSALSVR
ETEALLNQVL KLKAENVSSV LVTHNLYHAY QVCDRFVIMS HGTKVFDVQK ADTTISQLTE
YVVLT
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