Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5116 |
Symbol | |
ID | 5319418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 68395 |
End bp | 69063 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776894 |
Product | putative CheW protein |
Protein accession | YP_001313826 |
Protein GI | 150377231 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.119327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0201164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAC CTTCCCGTCC CGCTCTGCGC TCTCTCGACT GGACTGCCGT CAGAAGCCGT ATGGCAGAAG CGATAGAGCA GACGGAAGCG CATTTGAAAG CCGCGCAACA AGACGCGGAT GAGCAATCCG AGCGACGAGC GCCGCGCCCG GCCGTTGATG TGTCCACGGG ACGAAGCGAG GAAGCGACGG TCGGCGCAGT GATCTTCATG CTGGCGGATC GCCGGTTCGC GTTGGAGATC CGATACGTTT GCGAAATCGT TTCCAAGGCA CGCATCAGCC CGCTCCCCGG AATGCCCGCC CACGCCTGCG GCGTCTACGA CTTGCGCGGT CAACTGCTTC CCGTCTTCGA CCTGCTCGGA CCGCTCGATC TGCCGCGAAG GGCCGGCGTC GGCGACGATT GGGCAATCGT CTGCGGACAA GAGCAGCCGG AGTTTCTCAT CCTATCCGAA GCCGCCCCCG AAATCCTCAT GCTCCCCCTG GAGGAGATCG GCGCAGCGGA GCCCGCCCCA GGCAATGCAT GGCAATGGGC AACCATGAAA AACGGCTTGG TCATTGTCGA CGGCCGGCTC CTTCTGGATG ACCGCCGCTT CTACCTTGAC GACGAGCAGA CCGCCGTCAG TGACGAGACG GAAAGTACGG AGTTCCAAGA TGCCCCGATT GGCGAATAG
|
Protein sequence | MTTPSRPALR SLDWTAVRSR MAEAIEQTEA HLKAAQQDAD EQSERRAPRP AVDVSTGRSE EATVGAVIFM LADRRFALEI RYVCEIVSKA RISPLPGMPA HACGVYDLRG QLLPVFDLLG PLDLPRRAGV GDDWAIVCGQ EQPEFLILSE AAPEILMLPL EEIGAAEPAP GNAWQWATMK NGLVIVDGRL LLDDRRFYLD DEQTAVSDET ESTEFQDAPI GE
|
| |