| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5018 |
|---|
| Symbol | |
|---|
| ID | 5318757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 1541046 |
|---|
| End bp | 1541735 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640776800 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001313732 |
|---|
| Protein GI | 150377136 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.595113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAG GTGCTCATAT TTACATCGGC TTCGACAGCA AGGAAGTCGT CGCCTACCAT
GTTCTTTGCC AAAGTATTCT GGAAAAGAGC TCCATCCCGG TTACGTTCAC GCCCATATCG
CTGAACAATG TCGAGAATAT TTTTACGCGC GAGCGGAATC CTCTCCAATC AACCGAGTTT
TCCTTTTCGC GGTTCCTGGT GCCTTATCTA AGCCGTTATG AGGGCTGGTC GCTTTTCGCC
GACTGCGACA TGCTCATGCG GACTGACATC GCCCAGTTGT GGGAGTTGAG AGACGATCGC
TATGCAGCGA TGTGCGTAAA ACACGACTAC ATTCCGAAAG TCGAAACGAA GTTCCTGGGC
CAGGTCCAAA CCAAGTACGA AAAGAAGAAC TGGTCGAGCG TGATCCTGTT CAATAACGCT
AAGTGCCGAA AGCTCGATTT GGATTACGTC AATACTGCGT CTGGACTTGA GTTGCATCAG
TTCAAATGGC TTGATTCCGA CGACCTGATC GGCGAACTCC CCGCAAGTTG GAATTGGCTC
GTAAACGAGT ACGAATATTC ACCGGATGCA AAGCTTGTCC ATTTCACAGA TGGAGGGCCT
TACTTCGATG AGTATAAGAA CGATGACTAC GCCGAGGAAT GGTTCGCTAC ACGTGATCGT
GTACTTCATG TAACGCAGCG CTCGGCTTAA
|
|---|
| Protein sequence | MTQGAHIYIG FDSKEVVAYH VLCQSILEKS SIPVTFTPIS LNNVENIFTR ERNPLQSTEF
SFSRFLVPYL SRYEGWSLFA DCDMLMRTDI AQLWELRDDR YAAMCVKHDY IPKVETKFLG
QVQTKYEKKN WSSVILFNNA KCRKLDLDYV NTASGLELHQ FKWLDSDDLI GELPASWNWL
VNEYEYSPDA KLVHFTDGGP YFDEYKNDDY AEEWFATRDR VLHVTQRSA
|
|---|
| |