Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4987 |
Symbol | |
ID | 5318800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1500441 |
End bp | 1501907 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776769 |
Product | argininosuccinate lyase |
Protein accession | YP_001313701 |
Protein GI | 150377105 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00718333 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAAC CCACTCAGCT CTGGGGTGGA CGATTCAAGT CCGGACCGTC CGAAGCGCTT GCAAATCTGT CACGCGCGCC GAGCTCTTAC TTTCGCCTTT ACAGAGAGGA TATTGCGGGG TCGCGCGCTC ATGCTTCGGA ATTGAAGCGC GCCGGCGTCC TTGACGAGGG CGAATTCTCC GCGATACGAG CAGCCCTGGA AGCGATCGAA ACCGATGTCG GTGCCGGCCA TGAGAAGCCG ATTGCCGCTG ACGAGGATCT GCATACCTTT CTCGAACGCC TGCTGATGGC GCGCCTCGGC GCCCTTGGCG GCAAGCTTCG CGCCGGACGT TCCCGCAACG ATCAGACTGC GAACAATACG CGCCTTTATC TACGGCGTAT GGCGCGGGAG CTTTCCCGAG GCATTATCGC CGTCGAGGAA GCGCTGACGG AGCAGGCATC CCGGCATACG GAAACGGTAA TGCCCGGCTT TACTCATCTC CAGCCGGCCC AGCCGGTCGT GCTCGGGCAC CACCTCATGG CGCATGCGCA GTCGCTGCTG CGCGACCTTC AGCGTTTCGC GGATTGGGAC CGCCGATTCG ATCGGTCGCC GCTTGGCGCG GCCGCGCTAG CGGGATCGGG CATTGCCCGC CGTCCCGACC TTTCCGCCGT CGATCTCGGC TATTCGGCCG CGTGCGAGAA CTCCATCGAT GCTGTCGCAG CGCGCGACCA TGTCGCGGAG TTTCTCTTCA TCTGCTCGCT GGTGGCGGTG GATCTCTCCC GGCTTGCGGA GGAAATCTGC CTTTGGAGCT CCAAACAGTT CAGCTGGGTG CGGCTCGATG ATGCCTATTC CACAGGTTCC TCGATCATGC CGCAGAAGAA GAATCCCGAC GTCGCCGAAC TGACGCGCGG CATGTCCGGC ACGCTGATCG GCAACATTGC CGGGTTCCTG GCGACCATGA AGGCGATGCC GCTCGCCTAT AATCGCGACC TTGCCGAAGA CAAGCGCAGC CTGTTCGAGA CGATCGACAT TCTCGACCTG GTCCTGCCGG CCTTTGCCGG CATGGTGGGG ACGCTGGAAT TCGACGTGGA GAAACTGCGG GAGGAAGCGC CGAAGGGCTT CACCCTGGCG ACCGAAGTCG CCGACTGGCT GGTCGGACGG GACGTGCCCT TTGCGGAAGC GCACGAGATT ACCGGGGCCG TGGTCCGCTA CTGCGAAGAG CGCGGTCATG ATCTTGCCGG GCTGACCCCC GACGACCTGG CGAAGATCGA TCCGCGTCTT CACGCCGGGA TGCTCGCAGC GCTCACACTC GACAAGGCGC TTGCGAGCCG CACCGGATAC GGCGCAACCG CGCCGGAAAG GGTTCGCGAG CAGATCGCCC GTTTCGAAAC GGCACTTGCC GAATGCCGGG CCTTTGCTGC CGCCCCATCC GGCGGGGCGG CCTTTGCGGG TCCGAAGAGC GACGTAGAGG AGGAGCGACG TCGATGA
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Protein sequence | MAEPTQLWGG RFKSGPSEAL ANLSRAPSSY FRLYREDIAG SRAHASELKR AGVLDEGEFS AIRAALEAIE TDVGAGHEKP IAADEDLHTF LERLLMARLG ALGGKLRAGR SRNDQTANNT RLYLRRMARE LSRGIIAVEE ALTEQASRHT ETVMPGFTHL QPAQPVVLGH HLMAHAQSLL RDLQRFADWD RRFDRSPLGA AALAGSGIAR RPDLSAVDLG YSAACENSID AVAARDHVAE FLFICSLVAV DLSRLAEEIC LWSSKQFSWV RLDDAYSTGS SIMPQKKNPD VAELTRGMSG TLIGNIAGFL ATMKAMPLAY NRDLAEDKRS LFETIDILDL VLPAFAGMVG TLEFDVEKLR EEAPKGFTLA TEVADWLVGR DVPFAEAHEI TGAVVRYCEE RGHDLAGLTP DDLAKIDPRL HAGMLAALTL DKALASRTGY GATAPERVRE QIARFETALA ECRAFAAAPS GGAAFAGPKS DVEEERRR
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