Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4707 |
Symbol | |
ID | 5318857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1225079 |
End bp | 1225786 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776505 |
Product | putative membrane-anchored protein |
Protein accession | YP_001313437 |
Protein GI | 150376841 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.617832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTG TTTCCGAGAA ATCAAATGCC GCTCCGGAGC AGGACAACAC GAAACCGATG AGCGGCCGGG TCGACGCGAT CGACCAGGGG CGCATCTTCG GCTGGGCCTT CGATCCGGCA GCACCCACCA AACGCCTCAC CATCCGGGTA TATGTCGACG GAAGCGCCAT CGCCGAGGCG GTTGCCGATC GCAATCGCCC CGATCTCAAG CGCAACGGAA TCGGGGACGG CAGCCATGCA TTCGAAATCG CGCTTCCCGA GGCGGCGGCC TCACGCGCTG CCGATCTCAC GGTAACTGCC CTGGATGCGC GCGGCACGGA ACAAAAGTTG CGCGTTCCGC GCCCGGACGA GCAGGCGGCG GAAGCCCTTA TCGCTGCGCC GCTTGCCAAA GTTCTGGACA AGCTGGACGT CCTCATGGCG GCGCAGCGGC AATTGCAGGT TTCACAGCGG TCTTTCCAGC GCACGCAGAA TGACGAGGGC GGCGAAGGGG GGACTTTGCG ACCCGGCGCT GCCGCCGAGA TCGGGCAGCG CCTGAACGAT CTCGATGTCC ATCTCATGAG GCTCGATGGC GTGGTAGCAG CGATGGAGAA GAACCTCGGT GCCTTGCAGA AGCGGTCGAA TGGAGAGTTA AAACCGTTGC TGCTCCTGCT TTTCGTACTC GCGGGATTTG CCGCAGGAGC CGCCCTCTCA CTTTTTGCCG GCGCTTGA
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Protein sequence | MAAVSEKSNA APEQDNTKPM SGRVDAIDQG RIFGWAFDPA APTKRLTIRV YVDGSAIAEA VADRNRPDLK RNGIGDGSHA FEIALPEAAA SRAADLTVTA LDARGTEQKL RVPRPDEQAA EALIAAPLAK VLDKLDVLMA AQRQLQVSQR SFQRTQNDEG GEGGTLRPGA AAEIGQRLND LDVHLMRLDG VVAAMEKNLG ALQKRSNGEL KPLLLLLFVL AGFAAGAALS LFAGA
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