Gene Smed_4673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4673 
Symbol 
ID5318130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1185403 
End bp1187298 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content63% 
IMG OID640776471 
Productheat shock protein 90 
Protein accessionYP_001313403 
Protein GI150376807 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.25549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0194601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG TCGAAACGTC CGTCGAGAAA CATGTCTTCG AAGCCGATGT GGCGAAGCTG 
CTGCACCTGA TGGTGCACTC GGTCTATTCC GATAAAAACG TCTTTCTCCG CGAGCTGATT
TCGAACGCGG CAGACGCCTG CGAGAAGCTG CGCTACGAAG CGATCGTCGC GCCGGAGCTC
CTTGGCAGCG ACCCCACCTC GCGCATCACG CTGACGCTCG ATGAGGAGAA TGCCCGTCTT
ACGATCGAGG ACAATGGCAT AGGCATGGGC CGCGACGAAC TCGTCGAATC CCTCGGCACC
ATCGCTCGCT CCGGCACGCG CGCTTTCATG GAGCGGATAG AGGCGGCGCA GAACAAGGAC
GGCGCACAGC TCATCGGTCA GTTCGGCGTG GGCTTCTACT CCGCCTTCAT GGTCGCCGAC
AATGTCGATG TCGTTTCCCG CCGTGCCGGC ACCGACAAGG CCTGGCTCTG GGCGTCGGAC
GGCAAGGGCA GCTACACGGT CTCGGCGTTC GACCTTGCCG ACGCGCCCGC GCGCGGTACG
CGCATCACGC TGCATCTGAT GGAGGATGCC AAAACTTTCA CGTCGCGCTG GACGGTCGAA
GGCATCGTCA AGGAGCAATC CGGCCACGTC CCGGTTCCGA TCTCGATTGT CGAAAAGCCC
GGAGCGGAAC CGGTGCAGGT CGTGGACGGC ACGGCGCTCT GGACGAAGCA GAAAAGCGAA
ATCACCACGG AAGATTACAC CGACTTCTAT CGCGGCGTCG CCGGCCAGTA TGACGAGCCC
GCACTGACGG TGCATTTCCG TGCGGAGGGG CGTCACGAAT ACACCGCGCT CGCCTTCGTG
CCCGGCTCCA AGCCCTTCGA TCTCTTCGAT CCCGATCGCA AGGGCCGGAT GAAGCTCTAC
GTGAAGCGCG TCTTCATCAC CGACGAGGCG GAACTGCTGC CGCGCTATCT GCGCTTCGTA
CGCGGCCTGG TCGATACGGC AGACCTGCCC CTCAACGTCT CGCGCGAGAT GATCCAGGAA
AGTCCTCTTC TCGCAAACAT CCGCAAGGGG GTGACGAACC GCGTCCTCAC CAGCATCGAA
AAGCTCGCGG AAAGCGATCC GGAAGCTTTC GCCAAGCTGT GGGAAAACTT CGGCAGTGTG
ATCAAGGAAG GCATCTACGA AGATTTCGAG CGACGGGCAC AGCTCCTCGC CCTGTCGCGC
TTCCGCACCA CCGTCGACGA CGAAAAGCCG CGCAGCCTGA GCGATTACGT CAAGGAGATG
AAGGAAGGCC AAACGGCAAT CTATTACCTG ACCGGCGACA ACCTCGCGCA GCTTAAGGCC
TCGCCTCAGC TCGAAGGTTT CCGCGCCCGC GGCATCGAAG TGCTTCTCCT GACGTGCCCG
GTCGACAGCT TCTGGGTGAC GACGGCACCG GACTTCGAGG GGAAGCCGTT CAAATCGATC
ACGCAAGGTG CGGCAGATCT GGCGGGCATC GCAAAAAAGA ACGATGCGGC AGCCGCCGCT
TCGGCGGAAG CGGGTGTCGC GGTCACCGAT TTCTTGGCCT TCGCCAAGGA GACGCTCGGC
GACGCCGTTT CAGATGTCCG GACCTCCGAC CGCCTGACGG AGAGCGCCGT CTGCCTGGTT
GCAACGGAAC AGGGTCCGGA CCTACAGCTC CAGAAAATGC TGCAGGGGGC CGGGCGAATC
GAGAGCGCGG CAAAACCAGT GCTCGAGGTC AATCCCGGGC ATCAGCTGAT CACCGCCCTT
GCCGGCTGCC CCGGCGAGGA CAAGACGTTC CGCGAGGACG CGGTCAAGCT GCTGTTCGAC
CAGGCGCGCG TTCTCGACGG CGACAAGCCG GAGGATCCCC GCGCCTTCGC CGAACGGCTG
ACTCGCGTGT TCAGCCGAGC TTTGAAGGGG TCGTAA
 
Protein sequence
MSEVETSVEK HVFEADVAKL LHLMVHSVYS DKNVFLRELI SNAADACEKL RYEAIVAPEL 
LGSDPTSRIT LTLDEENARL TIEDNGIGMG RDELVESLGT IARSGTRAFM ERIEAAQNKD
GAQLIGQFGV GFYSAFMVAD NVDVVSRRAG TDKAWLWASD GKGSYTVSAF DLADAPARGT
RITLHLMEDA KTFTSRWTVE GIVKEQSGHV PVPISIVEKP GAEPVQVVDG TALWTKQKSE
ITTEDYTDFY RGVAGQYDEP ALTVHFRAEG RHEYTALAFV PGSKPFDLFD PDRKGRMKLY
VKRVFITDEA ELLPRYLRFV RGLVDTADLP LNVSREMIQE SPLLANIRKG VTNRVLTSIE
KLAESDPEAF AKLWENFGSV IKEGIYEDFE RRAQLLALSR FRTTVDDEKP RSLSDYVKEM
KEGQTAIYYL TGDNLAQLKA SPQLEGFRAR GIEVLLLTCP VDSFWVTTAP DFEGKPFKSI
TQGAADLAGI AKKNDAAAAA SAEAGVAVTD FLAFAKETLG DAVSDVRTSD RLTESAVCLV
ATEQGPDLQL QKMLQGAGRI ESAAKPVLEV NPGHQLITAL AGCPGEDKTF REDAVKLLFD
QARVLDGDKP EDPRAFAERL TRVFSRALKG S