Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4673 |
Symbol | |
ID | 5318130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1185403 |
End bp | 1187298 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776471 |
Product | heat shock protein 90 |
Protein accession | YP_001313403 |
Protein GI | 150376807 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.25549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0194601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAG TCGAAACGTC CGTCGAGAAA CATGTCTTCG AAGCCGATGT GGCGAAGCTG CTGCACCTGA TGGTGCACTC GGTCTATTCC GATAAAAACG TCTTTCTCCG CGAGCTGATT TCGAACGCGG CAGACGCCTG CGAGAAGCTG CGCTACGAAG CGATCGTCGC GCCGGAGCTC CTTGGCAGCG ACCCCACCTC GCGCATCACG CTGACGCTCG ATGAGGAGAA TGCCCGTCTT ACGATCGAGG ACAATGGCAT AGGCATGGGC CGCGACGAAC TCGTCGAATC CCTCGGCACC ATCGCTCGCT CCGGCACGCG CGCTTTCATG GAGCGGATAG AGGCGGCGCA GAACAAGGAC GGCGCACAGC TCATCGGTCA GTTCGGCGTG GGCTTCTACT CCGCCTTCAT GGTCGCCGAC AATGTCGATG TCGTTTCCCG CCGTGCCGGC ACCGACAAGG CCTGGCTCTG GGCGTCGGAC GGCAAGGGCA GCTACACGGT CTCGGCGTTC GACCTTGCCG ACGCGCCCGC GCGCGGTACG CGCATCACGC TGCATCTGAT GGAGGATGCC AAAACTTTCA CGTCGCGCTG GACGGTCGAA GGCATCGTCA AGGAGCAATC CGGCCACGTC CCGGTTCCGA TCTCGATTGT CGAAAAGCCC GGAGCGGAAC CGGTGCAGGT CGTGGACGGC ACGGCGCTCT GGACGAAGCA GAAAAGCGAA ATCACCACGG AAGATTACAC CGACTTCTAT CGCGGCGTCG CCGGCCAGTA TGACGAGCCC GCACTGACGG TGCATTTCCG TGCGGAGGGG CGTCACGAAT ACACCGCGCT CGCCTTCGTG CCCGGCTCCA AGCCCTTCGA TCTCTTCGAT CCCGATCGCA AGGGCCGGAT GAAGCTCTAC GTGAAGCGCG TCTTCATCAC CGACGAGGCG GAACTGCTGC CGCGCTATCT GCGCTTCGTA CGCGGCCTGG TCGATACGGC AGACCTGCCC CTCAACGTCT CGCGCGAGAT GATCCAGGAA AGTCCTCTTC TCGCAAACAT CCGCAAGGGG GTGACGAACC GCGTCCTCAC CAGCATCGAA AAGCTCGCGG AAAGCGATCC GGAAGCTTTC GCCAAGCTGT GGGAAAACTT CGGCAGTGTG ATCAAGGAAG GCATCTACGA AGATTTCGAG CGACGGGCAC AGCTCCTCGC CCTGTCGCGC TTCCGCACCA CCGTCGACGA CGAAAAGCCG CGCAGCCTGA GCGATTACGT CAAGGAGATG AAGGAAGGCC AAACGGCAAT CTATTACCTG ACCGGCGACA ACCTCGCGCA GCTTAAGGCC TCGCCTCAGC TCGAAGGTTT CCGCGCCCGC GGCATCGAAG TGCTTCTCCT GACGTGCCCG GTCGACAGCT TCTGGGTGAC GACGGCACCG GACTTCGAGG GGAAGCCGTT CAAATCGATC ACGCAAGGTG CGGCAGATCT GGCGGGCATC GCAAAAAAGA ACGATGCGGC AGCCGCCGCT TCGGCGGAAG CGGGTGTCGC GGTCACCGAT TTCTTGGCCT TCGCCAAGGA GACGCTCGGC GACGCCGTTT CAGATGTCCG GACCTCCGAC CGCCTGACGG AGAGCGCCGT CTGCCTGGTT GCAACGGAAC AGGGTCCGGA CCTACAGCTC CAGAAAATGC TGCAGGGGGC CGGGCGAATC GAGAGCGCGG CAAAACCAGT GCTCGAGGTC AATCCCGGGC ATCAGCTGAT CACCGCCCTT GCCGGCTGCC CCGGCGAGGA CAAGACGTTC CGCGAGGACG CGGTCAAGCT GCTGTTCGAC CAGGCGCGCG TTCTCGACGG CGACAAGCCG GAGGATCCCC GCGCCTTCGC CGAACGGCTG ACTCGCGTGT TCAGCCGAGC TTTGAAGGGG TCGTAA
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Protein sequence | MSEVETSVEK HVFEADVAKL LHLMVHSVYS DKNVFLRELI SNAADACEKL RYEAIVAPEL LGSDPTSRIT LTLDEENARL TIEDNGIGMG RDELVESLGT IARSGTRAFM ERIEAAQNKD GAQLIGQFGV GFYSAFMVAD NVDVVSRRAG TDKAWLWASD GKGSYTVSAF DLADAPARGT RITLHLMEDA KTFTSRWTVE GIVKEQSGHV PVPISIVEKP GAEPVQVVDG TALWTKQKSE ITTEDYTDFY RGVAGQYDEP ALTVHFRAEG RHEYTALAFV PGSKPFDLFD PDRKGRMKLY VKRVFITDEA ELLPRYLRFV RGLVDTADLP LNVSREMIQE SPLLANIRKG VTNRVLTSIE KLAESDPEAF AKLWENFGSV IKEGIYEDFE RRAQLLALSR FRTTVDDEKP RSLSDYVKEM KEGQTAIYYL TGDNLAQLKA SPQLEGFRAR GIEVLLLTCP VDSFWVTTAP DFEGKPFKSI TQGAADLAGI AKKNDAAAAA SAEAGVAVTD FLAFAKETLG DAVSDVRTSD RLTESAVCLV ATEQGPDLQL QKMLQGAGRI ESAAKPVLEV NPGHQLITAL AGCPGEDKTF REDAVKLLFD QARVLDGDKP EDPRAFAERL TRVFSRALKG S
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