Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4577 |
Symbol | |
ID | 5318024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1070114 |
End bp | 1071472 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776378 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001313310 |
Protein GI | 150376714 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTTCC GAAAAAAGCT TTTCAAGAAA ATCGGCGGCT TGCGACAAAT TCTCAGTCGA GAGAGAACGC TGCTCGAGCG CCTGCAGAGC ATTGCGCATC TGCTCACCGG AAACATTCTG AGCTCGGTGA TCGGCCTCAT CGGCTTTGCC CTCACGGCGA GGGCCCTCGG CCCGGCGGGC TATGGCATTC TCGCGCTGTG TTTCTCCTAT ACGCGCGCGG TCGAGAGGAT CGTAAGCTTC CAGTCCTGGC AACCGCTGAT CAAATACGGC GCGCACTCGC TCTCGGATAA CGCCGATGAC TTCAAAGAAA TGCAGTCCTT GCTCAAATTC GGGCTGCTGC TCGATGTTTC TGCGGCGCTC GCCGGATGGC TGATCGCCGT CCTGTTCATC CTGTTGGCCT CACCCTGGCT CGGGATCTCG GAGGACGGAG CGAGCCTTGC CATACTCTAC TGCACGGTGC TGCCATTCCA GGTATCCGGC ATGCCGACGG CCGTTTTGCG CCTTTACGGG CGCTTCATGG CGATCGCCTA CGGCCAGGTC GCCACAAGCG TCCTTAGGGT GGCTCTTTGC GCCATCGGCG TCGCCACGGG CGCCGGCCTG TTCGAATTCA CGCTCATCTG GATGTCGGCG CAGATCATCG GCACCCTCGT TCTCGTGCTT TTCGCGCTGG CCGAACTGCG CCGGCAAGGT ATCCTCTCGG GCCTGCTGAG CGCCCCGCTT CGCGGCATTA CCGCCCGGTT TCCGGGGCTT TGGAAGTTTG CGATCTCGGC GAACCTGTCG CTCACCATCC GTTCGAGCGC CAACGAGCTC GACACGCTGC TCGTCGGCTA TCTCGCCGAT CCGACTTCCG CCGGACTCTA TCACATCGCT AAACGCATCG GCCGCATCGC GCAGCAGGCC GGGGTGCAGG TACAGGCCGT CCTTTATCCG GAACTTGCCC GGGCATGGGC CGCCAAGGCG CTCGGCGCCT TTCATCGGGC AGTCGCACAG ATGCAGGCGC TTCTCCTCGC CTGCGGCCTC TTTCTGATCG GCGGCCTCTA TCTCCTTATC GGCCCTCTCC TCTCCTGGGC CGCCGGCCCG GAGTTCGCGG CCGCCGGCCC ACTCGTGATC GTGCAGTCGA TCGCCGTCAC GATGACCCTG TGCGGCGCCG TCATCCGGTC GGCGCTTCTG GCAATGGGAC GTGAGAACGA GATATTGCGC AGCGTCACGA TCGCCGCGAT CGGTTTTCAT GCGACTGCAT TCGCTCTCAT TCCGACCATG GGCGCCATGG GAGCGAATGT CGCTCATATC GTCATGGCTT CGATCTGGTT GTCAACGATG ATGCTGAGCT ACCGTCGCAC CCCGGCGCCA GGGCCTTGA
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Protein sequence | MAFRKKLFKK IGGLRQILSR ERTLLERLQS IAHLLTGNIL SSVIGLIGFA LTARALGPAG YGILALCFSY TRAVERIVSF QSWQPLIKYG AHSLSDNADD FKEMQSLLKF GLLLDVSAAL AGWLIAVLFI LLASPWLGIS EDGASLAILY CTVLPFQVSG MPTAVLRLYG RFMAIAYGQV ATSVLRVALC AIGVATGAGL FEFTLIWMSA QIIGTLVLVL FALAELRRQG ILSGLLSAPL RGITARFPGL WKFAISANLS LTIRSSANEL DTLLVGYLAD PTSAGLYHIA KRIGRIAQQA GVQVQAVLYP ELARAWAAKA LGAFHRAVAQ MQALLLACGL FLIGGLYLLI GPLLSWAAGP EFAAAGPLVI VQSIAVTMTL CGAVIRSALL AMGRENEILR SVTIAAIGFH ATAFALIPTM GAMGANVAHI VMASIWLSTM MLSYRRTPAP GP
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