| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4552 |
|---|
| Symbol | |
|---|
| ID | 5318414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1038362 |
|---|
| End bp | 1039444 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640776353 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001313285 |
|---|
| Protein GI | 150376689 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCC TCGAAATCCG CAACGTCCGT AAGCGCTACG GCGAGGTCGA AACGCTGAAG
GGCATCGATA TCGCGCTCGA AAGCGGAGAA TTCCTCGTGC TGCTCGGCTC CTCCGGATGC
GGCAAGTCCA CGCTCCTCAA TATCATCGCC GGACTTTCCG AACCGAGCGG AGGCGACATC
CTGATCGGCG AACGCTCGGT GCTGGGCGTT CACCCGAAAG ACCGCGACAT AGCAATGGTC
TTCCAGTCCT ATGCGCTCTA TCCGAACCTG ACCGTCGCCC GCAACATCGG CTTCGGCCTG
GAAATGCGCC GGGTGCCGCG GGCCGAGCGC GACAGGGCTG TTTGCGACAC TGCCAGGCTC
TTGCAGATCG AGGATCTTCT CGAGCGAAAG CCGAGCCAGC TCTCCGGCGG TCAGCGCCAG
CGCGTCGCGA TCGGCCGGGC TCTGGTGCGC GACCCCCAGG TGTTCCTTTT CGACGAGCCG
CTGTCGAACC TCGATGCCAA GCTCCGGATG GAGATGCGGA CCGAACTCAA ACGCCTGCAC
CAGATGCTGA AAACGACAGT CGTCTACGTG ACCCACGACC AGATCGAGGC GATGACGCTC
GCAACCCGCA TCGCCGTGAT GCGCGACGGC CGCATCGAGC AGCTCGCCAC GCCGGAAGAG
ATTTACGACC GCCCCGCAAC GCTCTATGTC GCCGGCTTCG TCGGCTCGCC GCCGATGAAC
ATTCTCGATG CCGAAGTGAC CGCAAGCGGC CTGAAGCTCG ACGGCTGCGA GGAGGTGCTT
CCCTTGCCGG CAGCATTCGA CGGGACCGCC TTGGCGGGTC GGCGCGCGAA GGTCGGCATC
CGGCCGGAGG CAATGCGGCT CGCAGCCGAG TCAGAGGATC CGCGATTGAC CGCTGACATC
GAGGTGGTGG AACTCACAGG ACCGGAACTC GTGACCACGG CCACAGTCGG CAGGCAGCGC
ATCACCGCCT GCCTGCCGCC GCGCACAGCA CTCGGCACGG GTTCGGTACA TGCCTTCACC
TTCGATGAAA CGGCCATGCA TCTTTTCGAT CCGGAAAGCG GCCGATCGCT TAAAGTGGGA
TGA
|
|---|
| Protein sequence | MSALEIRNVR KRYGEVETLK GIDIALESGE FLVLLGSSGC GKSTLLNIIA GLSEPSGGDI
LIGERSVLGV HPKDRDIAMV FQSYALYPNL TVARNIGFGL EMRRVPRAER DRAVCDTARL
LQIEDLLERK PSQLSGGQRQ RVAIGRALVR DPQVFLFDEP LSNLDAKLRM EMRTELKRLH
QMLKTTVVYV THDQIEAMTL ATRIAVMRDG RIEQLATPEE IYDRPATLYV AGFVGSPPMN
ILDAEVTASG LKLDGCEEVL PLPAAFDGTA LAGRRAKVGI RPEAMRLAAE SEDPRLTADI
EVVELTGPEL VTTATVGRQR ITACLPPRTA LGTGSVHAFT FDETAMHLFD PESGRSLKVG
|
|---|
| |