Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4487 |
Symbol | |
ID | 5319179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 971781 |
End bp | 972911 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640776288 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001313220 |
Protein GI | 150376624 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGAAG TTTTGATCGT GGGCGGCGGC ATCATGGGCC TGTGGGCCGC TGTGATGGCT GGGCGCGCCG GCTTTACGAC GCGGCTTCTC GAGCGATGGC GGATCGGTTC CGGCGCGAGC GGCGGTTTCC TCGGCGCGCT CATGCCGCAT ATGCCTGACC GTTGGAACGA GAAGAAGCAG TTTCAGTTCG ATGCCCTGGT GTCGCTCGAA GGCGAGATCG CCGAGCTTGA AGCCGCAACC GGCCTCTCGG CAGGCTACCG CCGCTCCGGT CGGGTCATGC CCATTGGGAG AGCACATCTG CGCGAGATCG CCCACGGCCG TGAGCGGGAT GCGGCACAGA ATTGGCGAGG GCCGGCACAC CAATACCTTT GGCAGGTCGG CCACGCCGAT GAAGGCGGTT GGCCGGCCGC CGATGCGGCG CCCTTCGGTA TCGTCCAGGA CACGCTGGCC GCGCGGGTGG CGCCACGCAA CCTTCTTGCG GTGCTGCGTG CCGCACTGGA CCAATTTCCG CATGTTCAAT GCGAGGAAGG TGCGGAAGTC GTCTCGATCG AGCCGGCACG CGGCCGGCTT TTGCTCGCGG ACGGGCGCGC TTTGACCTTC GATCGCCTGA TCCTCGCCGC CGGCGTCGCA AGCTTCGGCT TCATCGATGG TCTGACACAG CCCAGGCGGT CTGCAAGCGG CGGTGCCGTC AAGGGCCAGG CAGCGCTGTT TCGCGCCGAT GTCGACAAAG CCTTGCCGAT CATCTTTACC GAAGGGCTTT ATATCGTTCC GCACGAAAAC GGACAGGTGG CGGTCGGCAG CACGAGCGAA AGCCGGTTCG ACGACCCCAA TTTTACCGAT CGTCAGCTTG ATGCCCTGCT TGCGCGCGCA ATCGATATCG CGCCCGTTTT GCGTAGCGCC ACGGTAATCG AACGCTGGGC GGGCCTGCGT CCCAGGGCGA CAGGGCTCGA GCCCATGGTT GGTCGTCACC CGGATCACGA AAGGCTTTTC GTCTTGACCG GGGGCTTCAA GGTGAGCTTC GGGCTGGCGC ATGCATTGGC ACGATCCGTG GTGGAAGAGA TCGCCGGCGG CGGCATGAAC GCCTTGCCTG AGAGCTTTCA ATGTGCGCAT CACGTCGCCG CCCTGCGCTA G
|
Protein sequence | MCEVLIVGGG IMGLWAAVMA GRAGFTTRLL ERWRIGSGAS GGFLGALMPH MPDRWNEKKQ FQFDALVSLE GEIAELEAAT GLSAGYRRSG RVMPIGRAHL REIAHGRERD AAQNWRGPAH QYLWQVGHAD EGGWPAADAA PFGIVQDTLA ARVAPRNLLA VLRAALDQFP HVQCEEGAEV VSIEPARGRL LLADGRALTF DRLILAAGVA SFGFIDGLTQ PRRSASGGAV KGQAALFRAD VDKALPIIFT EGLYIVPHEN GQVAVGSTSE SRFDDPNFTD RQLDALLARA IDIAPVLRSA TVIERWAGLR PRATGLEPMV GRHPDHERLF VLTGGFKVSF GLAHALARSV VEEIAGGGMN ALPESFQCAH HVAALR
|
| |