| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4477 |
|---|
| Symbol | |
|---|
| ID | 5318342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 959217 |
|---|
| End bp | 960713 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640776278 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001313210 |
|---|
| Protein GI | 150376614 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.749064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCG CGTGCCGTAA CCCGGCCGTC GCGCTTGCGG AAGAAGACAA GGAAGCGGAA
GCCATGACAC TTCACCAGAA CCTGATCGCC GGCGAATGGG TCGGCGAAGA CGGCGTTGCG
AACGTCAACC CGTCGAACAC CAATGACGTC GTCGGAGATT ATGCCCGCGC CAGCGCCGAA
GACGCGAAAG CCGCGATTGC GGCGGCCAAG GCTGCCTTTC CCACCTGGTC GCGCTCCGGC
ATCCTCGAGC GCCATGCGAT CCTGAAGAAA ACCGCCGACG AAATCCTCGC CCGCAAGGAC
GAGCTGGGAC GGCTGCTGTC GCGTGAGGAG GGCAAGACCC TCGCCGAGGG GATCGGCGAA
ACGGTCCGGG CCGGTCAGAT CTTCGAATTC TTCGCCGGCG AAACTTTGCG CCTCGCTGGC
GAGGTCGTCC CATCGGTCAG GCCGGGCATC GGCGTCGAGA TCACCCGCGA GCCGGTCGGC
GTCGTTGGCA TCATCACGCC CTGGAACTTT CCCATCGCCA TTCCCGCCTG GAAGGTCGCT
CCGGCGCTCT GCTACGGCAA TACCGTCGTC TTCAAGCCGG CGGAACTGGT ACCGGGCTGT
TCATGGGCGA TCGTCGATAT CCTCCATCGT GCGGGCCTGC CAAAGGGCGT ACTGAACCTC
GTCATGGGCA AGGGTTCGGT CGTAGGCCAG GCAATGCTCG ACAGCCCGGA CGTTCAGGCG
ATAACCTTCA CTGGCTCGAC CGCAACCGGA AAACGGGTCG CAGTCGCCTC GGTCGAACAT
AACCGCAAAT ACCAGTTGGA GATGGGAGGT AAGAACCCGT TCGTCGTTCT CGACGACGCC
GATCTTTCCG TTGCCGTCGA AGCGGCAGTC AATTCCGCCT TTTTCTCGAC CGGTCAGCGT
TGCACCGCCT CCTCGCGGAT CATCGTCACC GAGGGCATCC ATGACCGGTT CGTCGCCGCC
ATGGGCGAGC GGATCAAGGG TCTCGTCGTC GACGACGCGC TGAAGGCCGG CACCCATATC
GGACCGGTGG TCGATCAGAG CCAGCTCAAT CAGGACACCG ACTACATCGC CATCGGCAAG
AAGGAGGGCG CGAAGCTCGC CTTCGGCGGT GAACTGGTCT CGCGTGACAC GCCCGGCTTC
TATCTGCAGC CGGCGCTGTT CACCGAGGCG ACGAACGATA TGCGTATCTC CCGCGAGGAA
ATCTTCGGAC CTGTCGCGGC CGTCATCCGC GTCAGGGATT ACGATGAAGC GCTGGCCGTC
GCCAATGACA CGCCCTTCGG TCTGTCTTCG GGTATCGCCA CCACCAGCTT GAAACACGCG
ACGCACTTCA AGCGCAATGC CGAGGCCGGC ATGGTGATGG TCAACCTGCC CACGGCGGGT
GTCGACTTCC ACGTGCCGTT CGGCGGCCGC AAGGCTTCCT CCTACGGTCC TCGCGAGCAG
GGCAAATACG CCGCTGAATT CTACACCAAT GTCAAAACCG CCTACACGCT GGCTTGA
|
|---|
| Protein sequence | MAGACRNPAV ALAEEDKEAE AMTLHQNLIA GEWVGEDGVA NVNPSNTNDV VGDYARASAE
DAKAAIAAAK AAFPTWSRSG ILERHAILKK TADEILARKD ELGRLLSREE GKTLAEGIGE
TVRAGQIFEF FAGETLRLAG EVVPSVRPGI GVEITREPVG VVGIITPWNF PIAIPAWKVA
PALCYGNTVV FKPAELVPGC SWAIVDILHR AGLPKGVLNL VMGKGSVVGQ AMLDSPDVQA
ITFTGSTATG KRVAVASVEH NRKYQLEMGG KNPFVVLDDA DLSVAVEAAV NSAFFSTGQR
CTASSRIIVT EGIHDRFVAA MGERIKGLVV DDALKAGTHI GPVVDQSQLN QDTDYIAIGK
KEGAKLAFGG ELVSRDTPGF YLQPALFTEA TNDMRISREE IFGPVAAVIR VRDYDEALAV
ANDTPFGLSS GIATTSLKHA THFKRNAEAG MVMVNLPTAG VDFHVPFGGR KASSYGPREQ
GKYAAEFYTN VKTAYTLA
|
|---|
| |