Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4465 |
Symbol | |
ID | 5317936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 945633 |
End bp | 946418 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776266 |
Product | ABC transporter related |
Protein accession | YP_001313198 |
Protein GI | 150376602 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC AACGCACTCC GCTGGTGGAA ATGAAGAATA TTTCCATCTC CTTCGGCGGC ATCCATGCGG TGGACAATGC TTCCGTCGAT CTCTACCCCG GCGAGGTCGT CGCCCTCCTC GGCCATAACG GCGCCGGAAA ATCGACGCTG ATCAAGATTC TCTCCGGCGC CTACAGGCGC GATGCCGGCG AGATCCTGAT CAACGGCGAA CCTGCCGAGA TCGGCAATCC GCGAGACGCC AAGAAATACG GCATCGAGAC GATCTACCAG ACACTCGCGG TCGCCGACAA TGTCGACGCC GCAGCCAACC TCTATCTCGG CCGCGAACTG CGCACCCCCT GGGGCACGCT GGACGATGTG GCAATGGAAG CCAAGGCACG CGAGGTGATG GGACGGCTCA ATCCCAACTT CCAGCGCTTC AAGGAGCCGG TGAAAGCGCT TTCCGGCGGC CAGCGGCAAT CGGTTGCGAT CGCCCGCGCC ATCCTCTTCG ACGCCCGCAT CCTGATCATG GACGAACCGA CCGCGGCACT CGGACCCCAG GAGACAGCAC AGGTCGGCGA ACTCATCAAA CAATTGAAGC GCGAGGGCAT CGGCATCTTC CTGATCAGCC ACGACATCCA CGATGTCTTC GACCTTGCCG ACCGTGTCTC CGTGATGAAA AACGGCCAGG TCGTCGGCCA CGCCCGCACC GAGGACGTGA CGAAGGACGA GGTGCTCGGC ATGATCATCA TGGGCAAGGT GCCCCCCAAG GCGATCCCCG GTCCCGGCGC CATGCAGATG GCGTGA
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Protein sequence | MTEQRTPLVE MKNISISFGG IHAVDNASVD LYPGEVVALL GHNGAGKSTL IKILSGAYRR DAGEILINGE PAEIGNPRDA KKYGIETIYQ TLAVADNVDA AANLYLGREL RTPWGTLDDV AMEAKAREVM GRLNPNFQRF KEPVKALSGG QRQSVAIARA ILFDARILIM DEPTAALGPQ ETAQVGELIK QLKREGIGIF LISHDIHDVF DLADRVSVMK NGQVVGHART EDVTKDEVLG MIIMGKVPPK AIPGPGAMQM A
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