Gene Smed_4104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4104 
Symbol 
ID5318993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp566649 
End bp567626 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content64% 
IMG OID640775911 
Producthypothetical protein 
Protein accessionYP_001312844 
Protein GI150376248 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.513428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TGAACGCGCT TCTGAGCGCA GCCGCGGCCG TTTCTCTTTT TGCCGTTTCG 
GCGAGCGCCC AGACCTATCC GGAGCGCACG ATCACCATGG TGGTGCCGTT CTCGGCCGGC
GGCCCGACCG ATACGGTTGC CCGCCTGGTC GCCGAGTCCA TGTCCAAGGA TCTCGGTCAG
CAGATCATCG TCGAGAATGT CGGCGGCGCC GGCGGGACGC TGGGAGCCGG CCGCGTCGCC
CAGGCCGAGC CGGACGGCTA TACGCTGCTT CTGCATCATA TCGGCATGGC CACCAGCGCC
ACGCTCTATC GCAAGCTCGC CTATGACACG CTGAATGCCT TCGAATATGT CGGCCTCGTC
ACCGAGGTTC CGATGACGAT CGTCGCCCGC AAGGACTTCG AACCGACCGA CCTGAAGAGC
CTGATCGAAC ACGTCAAGGC CAACAAGGAC ACGGTGACTG TCGCCAATGC CGGCATCGGC
GCCGCGTCCC ATCTTTGCGG CATGATGTTC ATGAGCGCGA TCGAAACGCC GCTGACGACC
GTGCCCTACA AAGGCACCGG CCCGGCGATG ACCGACCTGC TCGGCGGCCA GGTCGATATC
ATGTGCGATC AGACGACGAA CACGACGAAG CAGATCCAGG GCGGCACGAT CAAGGCCTAT
GCCGTGACCT CGCCGGAGCG GCTCAAGATC TTCCCTGACC TGCCGACCGC CGAGGAAGCG
GGTCTTTCCG GCTTCCAGGT CGGCATCTGG CACGGCGTCT ATGCACCGAA GGGCACGCCT
GCCGAAGTGA CCGACCGCCT GTCGAAATCG CTGCAGAAAG CGCTCAAGGA CGAGAACGTG
GTTGCCCGCT TCGGCGAACT CGGCACCGAG CCGTCAAGCG ACGCCGACGC CACGCCGGCG
GCACTGAAGG CGAAGCTGGA AAGCGAGATT GCCCGCTGGA AGCCGGTGAT CGAAGCGGCC
GGCCAGTACG CCGACTGA
 
Protein sequence
MKILNALLSA AAAVSLFAVS ASAQTYPERT ITMVVPFSAG GPTDTVARLV AESMSKDLGQ 
QIIVENVGGA GGTLGAGRVA QAEPDGYTLL LHHIGMATSA TLYRKLAYDT LNAFEYVGLV
TEVPMTIVAR KDFEPTDLKS LIEHVKANKD TVTVANAGIG AASHLCGMMF MSAIETPLTT
VPYKGTGPAM TDLLGGQVDI MCDQTTNTTK QIQGGTIKAY AVTSPERLKI FPDLPTAEEA
GLSGFQVGIW HGVYAPKGTP AEVTDRLSKS LQKALKDENV VARFGELGTE PSSDADATPA
ALKAKLESEI ARWKPVIEAA GQYAD