Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4104 |
Symbol | |
ID | 5318993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 566649 |
End bp | 567626 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775911 |
Product | hypothetical protein |
Protein accession | YP_001312844 |
Protein GI | 150376248 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.513428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTC TGAACGCGCT TCTGAGCGCA GCCGCGGCCG TTTCTCTTTT TGCCGTTTCG GCGAGCGCCC AGACCTATCC GGAGCGCACG ATCACCATGG TGGTGCCGTT CTCGGCCGGC GGCCCGACCG ATACGGTTGC CCGCCTGGTC GCCGAGTCCA TGTCCAAGGA TCTCGGTCAG CAGATCATCG TCGAGAATGT CGGCGGCGCC GGCGGGACGC TGGGAGCCGG CCGCGTCGCC CAGGCCGAGC CGGACGGCTA TACGCTGCTT CTGCATCATA TCGGCATGGC CACCAGCGCC ACGCTCTATC GCAAGCTCGC CTATGACACG CTGAATGCCT TCGAATATGT CGGCCTCGTC ACCGAGGTTC CGATGACGAT CGTCGCCCGC AAGGACTTCG AACCGACCGA CCTGAAGAGC CTGATCGAAC ACGTCAAGGC CAACAAGGAC ACGGTGACTG TCGCCAATGC CGGCATCGGC GCCGCGTCCC ATCTTTGCGG CATGATGTTC ATGAGCGCGA TCGAAACGCC GCTGACGACC GTGCCCTACA AAGGCACCGG CCCGGCGATG ACCGACCTGC TCGGCGGCCA GGTCGATATC ATGTGCGATC AGACGACGAA CACGACGAAG CAGATCCAGG GCGGCACGAT CAAGGCCTAT GCCGTGACCT CGCCGGAGCG GCTCAAGATC TTCCCTGACC TGCCGACCGC CGAGGAAGCG GGTCTTTCCG GCTTCCAGGT CGGCATCTGG CACGGCGTCT ATGCACCGAA GGGCACGCCT GCCGAAGTGA CCGACCGCCT GTCGAAATCG CTGCAGAAAG CGCTCAAGGA CGAGAACGTG GTTGCCCGCT TCGGCGAACT CGGCACCGAG CCGTCAAGCG ACGCCGACGC CACGCCGGCG GCACTGAAGG CGAAGCTGGA AAGCGAGATT GCCCGCTGGA AGCCGGTGAT CGAAGCGGCC GGCCAGTACG CCGACTGA
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Protein sequence | MKILNALLSA AAAVSLFAVS ASAQTYPERT ITMVVPFSAG GPTDTVARLV AESMSKDLGQ QIIVENVGGA GGTLGAGRVA QAEPDGYTLL LHHIGMATSA TLYRKLAYDT LNAFEYVGLV TEVPMTIVAR KDFEPTDLKS LIEHVKANKD TVTVANAGIG AASHLCGMMF MSAIETPLTT VPYKGTGPAM TDLLGGQVDI MCDQTTNTTK QIQGGTIKAY AVTSPERLKI FPDLPTAEEA GLSGFQVGIW HGVYAPKGTP AEVTDRLSKS LQKALKDENV VARFGELGTE PSSDADATPA ALKAKLESEI ARWKPVIEAA GQYAD
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