Gene Smed_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4013 
Symbol 
ID5318822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp469325 
End bp470272 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content65% 
IMG OID640775821 
Productribokinase-like domain-containing protein 
Protein accessionYP_001312754 
Protein GI150376158 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA TCGTCCTGCT TGGTGACATC AACGTCGATC TGGCCCTTGA GATCTCCACT 
TATCCGCCCG AAGGCGGAGA GGCGATCGCG ACCGCCCAGA GGATGTTTCT GGGCGGTTCT
GCGACGAATA CGGCGGTTGC CCTTTCGAGG TCGGGGCACC GATGCAGGCT TATCGGCAGG
GTCGGTGATG ACGGCTGGGG CAAACAGGCC CTTCGGGATC TGCGAGGCGA GGGTATAGAC
ACCACTTGGA TCGGTCGGGA TTCGGCAGAA CCGACCCAGA TCAATGTCGT GACCGTCGGC
AGCACCGGCG AGCGAACCAT GTTCGCCTAT CGCGGCGCCA ATGCACAGCT TTCGCCGGCC
GCAATCGACG CGGCGGCGTT CGATGCAGCC GAACTCTTCC ACCTGTCCGG CTACGCCTTC
CTGCAGAGCC CCCAATCGGA GGCTGCCGAT CATGCAATCG GCCTGGCCGT CGCCCGCAAC
ATTCCGATCA CCCTCGATAT TCCGGGCGGC ATCGTTTCGA GGCTTGCATC GCGCGTACGG
ACCATCCTGC CGAGGCTTGA CACGATCGTG CTCGGCGATG CGGACCTAGC TCCGCTGGCC
GACAAGCCGT ACGGCACAAG CCTGGAAGAG GCAGTTCGCG CCCTGCTCGA TCTCGGCGTC
GAACGCGTTG CGGTAAAGGC GAATGAGGGT CGGTCGTTGC TCTGTAGCGC AGGGGTGACG
GAGAGCGCCT CCTGGCTCCC CGCCGATGCT TTCGATACCA CGGGAGCCGG CGACGCCTTC
GCCGCCGGGC ACATCCATGG CCGCCTCACC GGAATGACGG GACGGGAATG CTGCCGTCTT
GCTAATGCCT TCGGCGCGCT GGCGGTCGCC CGGCGAGGAG CCGGTCTCGC CATGCCGGCG
ATCGATGAGG CCCTCGCCTT GCTGGGGGCC TCGGACGGGC CATCATGA
 
Protein sequence
MSVIVLLGDI NVDLALEIST YPPEGGEAIA TAQRMFLGGS ATNTAVALSR SGHRCRLIGR 
VGDDGWGKQA LRDLRGEGID TTWIGRDSAE PTQINVVTVG STGERTMFAY RGANAQLSPA
AIDAAAFDAA ELFHLSGYAF LQSPQSEAAD HAIGLAVARN IPITLDIPGG IVSRLASRVR
TILPRLDTIV LGDADLAPLA DKPYGTSLEE AVRALLDLGV ERVAVKANEG RSLLCSAGVT
ESASWLPADA FDTTGAGDAF AAGHIHGRLT GMTGRECCRL ANAFGALAVA RRGAGLAMPA
IDEALALLGA SDGPS