Gene Smed_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3944 
Symbol 
ID5318052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp394439 
End bp394849 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content62% 
IMG OID640775754 
Productcytochrome c class I 
Protein accessionYP_001312687 
Protein GI150376091 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.696873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAA GACTTGGTTC CGTACTGACC GCTGCCGTCC TGATTGGCGG AATTCTCGGC 
GCAGCCGCGC CGGCACTTGC ACTGGATCCC GCAGCCGGAG ATCCAGCGGC GGGCGCGAAA
GTCTTCCGCA AGTGTCAGGC CTGTCATACG GTCGGCCCGG ATGCCAAATC GAAAACCGGC
CCCTTGCTGA ACGGGATCAT CGGCCGGTCT GCGGGCAAGG TCGAGGGCTA CGCCTATTCC
CCGGCGATCG AGAAAGCGGC TGAGGCCGGG CTTACCTGGA CGCCGGAAAA GATCGCCGAG
TTTCTGACCA GTCCGAAGGG CTTCCTGCCC GGCACCAAGA TGACCTTTGC GGGACTGCGC
AAGGATCAGG AACGTGCCGA CATCATCGCA TATCTGGCAA CTTTCCCCTG A
 
Protein sequence
MASRLGSVLT AAVLIGGILG AAAPALALDP AAGDPAAGAK VFRKCQACHT VGPDAKSKTG 
PLLNGIIGRS AGKVEGYAYS PAIEKAAEAG LTWTPEKIAE FLTSPKGFLP GTKMTFAGLR
KDQERADIIA YLATFP