Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3891 |
Symbol | |
ID | 5318685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 349107 |
End bp | 350192 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775703 |
Product | hypothetical protein |
Protein accession | YP_001312636 |
Protein GI | 150376040 |
COG category | [S] Function unknown |
COG ID | [COG4641] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.172461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG CATTTTACGG ATCGAGCCTC GTTTCGGCCT ACTGGAACGG CGCGGCCACC TACTATCGCG GCCTGCTCCG TGCTCTCGCG CAACGGGGCT ATCAGATCAC CTTCTATGAG CCTGATGTCT ACGACCGGCA AATGCACCGC GACATCGATC CGCCCTTCTG GTGCAAGGTC GTCGTCTACG AAGGGACCAT TGAAGGTCTG AAAAGCGTCG CCGGGAAAGC CGGTGAGGCC GACATCGTCG TCAAGGCGAG CGGAGTGGGC TTTGAGGACG AGTTACTGCT CGCCGAGGTC ATGGCGGCGG CGGATCCAGC GGCATTGAAG ATCTTCTGGG ACGTCGATGC ACCTGCCACG CTGGCCGATC TCAGGGCCGC GCCCGACCAC CCGCTTCGTC GCGCGCTTCC CTCTCTGGAT CTCGTTCTGA CCTATGGCGG CGGCGATCCC GTGGTCGGCG CCTATCGGGC TCTCGGTGCC CGCGAATGCG TTCCGATCTA CAATGCCGTC GATCCCGAGA CGCACTATCC GGTTTCGCCG GACCCGCGCT TTAACGCGGA TCTCGCCTTC CTCGGCAATC GCCTGCCGGA CCGGGAGGAG CGGGTGGAAG CCTTCTTCCT CGAGCCGGCG CAAAAGCTCT GGCAGCGGCG TTTCCTGCTT GGCGGAGCGG GTTGGCATGA CAAATCCCTG TCCCCGAACG TCGCCTATAT CGGTCATGTC CCGACGGCGG ACCACAATGC CTTCAACACG ACACCGACTG CCGTATTGAA CATTTCGCGC TCCAGCATGG CCGATAACGG CTTTTCGCCG GCAACCCGCG TATTCGAGGC GGCCGGCGCC GGTGCCTGCC TGATCACCGA CTACTGGGAG GGGATCGAAC TTTTCCTGAA GCCCGGAGAA GAAGTGCTGG TCGCCAGAGA CGGCCGCGAC GTCGCCGAGC TGATGCAGAA ACTGACCAGC GCTAACGCCA GGGAGATCGG CGAGCGCGCG CTGCGCCGCG TGCTGGCCGA GCACACCTAT GCGCATCGTG CCGCAGAAGT GGACCGCATC TTGCGCCAGG CGCGCCGGAT GGAGGCTGCC GAATGA
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Protein sequence | MKLAFYGSSL VSAYWNGAAT YYRGLLRALA QRGYQITFYE PDVYDRQMHR DIDPPFWCKV VVYEGTIEGL KSVAGKAGEA DIVVKASGVG FEDELLLAEV MAAADPAALK IFWDVDAPAT LADLRAAPDH PLRRALPSLD LVLTYGGGDP VVGAYRALGA RECVPIYNAV DPETHYPVSP DPRFNADLAF LGNRLPDREE RVEAFFLEPA QKLWQRRFLL GGAGWHDKSL SPNVAYIGHV PTADHNAFNT TPTAVLNISR SSMADNGFSP ATRVFEAAGA GACLITDYWE GIELFLKPGE EVLVARDGRD VAELMQKLTS ANAREIGERA LRRVLAEHTY AHRAAEVDRI LRQARRMEAA E
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