| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3808 |
|---|
| Symbol | |
|---|
| ID | 5318362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 260868 |
|---|
| End bp | 261761 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640775620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001312553 |
|---|
| Protein GI | 150375957 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4813] Trehalose utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTC CCCGTGGGGT TTACCCGGCC CGGCTCCGTG CCCGCAGACT CAAATCACGG
ACAGCTGGCA TCCGGCAGCG GGTGCCCCAA ACCACGAGGA GAATGAACTT GTCTATCAAT
GCCATCGTGT GGGGTGAGAA TATCCACGAG CAGACGAATG CGGTGGTTCG GGAGATCTAT
CCCGAGGGCA TGCACAACAC GATCGCCGCC GCGCTCAATT CCGACCCGGG GATCAATGCG
ACGACGGCGA CATTGCAGGA GCCCGAGCAC GGGCTGAGCG AGGCGCGGCT TGCCGCAGCC
GATGTTCTCC TGTGGTGGGG CCACAAGGAT CATGGGGCGG TCGACGACGC TATCGTCGAG
CGCGTAGCCA AACGCGTTTG GGAGGGAATG GGCCTCATCG TTCTTCATTC CGGCCACTTC
TCCAAGGTTT TCAAGCGGCT GATGGGCACG CCATGCGCGC TGAAATGGCG TGAGGCGGGA
GAGCGCGAGC GCGTCTGGGT CGTCAACCCG CGACACCCGA TTGCCGAGGG CCTGGGCGAA
AACTTCGTGA TCGAGAATGA AGAAATGTAT GGCGAGCAAT TCTCGGTGCC GGAGCCGTTG
GAGACGGTCT TCATCTCCTG GTTTGCCGGC GGCGAGGTAT TTCGCTCAGG GCTGACCTGG
CGGCGCGGCG CGGGCAATAT CTTCTATTTC CGCCCCGGAC ATGAAACCTA TCCCACCTAT
CACGATGCGA CCGTGCACAA GGTGCTGCGG AACGCGGTGA AATGGGCATA CAACCCGCAG
GGCACGTATA AGGCCATCCA CGACGCACCC AACGTCCCGG TGGAGAAGGC GCTGGAGCCG
ATCGTCGAGC GCGGCCCGAG ACTGCACAAG GCCGGCGAAG CCGGATATCG GTAA
|
|---|
| Protein sequence | MAGPRGVYPA RLRARRLKSR TAGIRQRVPQ TTRRMNLSIN AIVWGENIHE QTNAVVREIY
PEGMHNTIAA ALNSDPGINA TTATLQEPEH GLSEARLAAA DVLLWWGHKD HGAVDDAIVE
RVAKRVWEGM GLIVLHSGHF SKVFKRLMGT PCALKWREAG ERERVWVVNP RHPIAEGLGE
NFVIENEEMY GEQFSVPEPL ETVFISWFAG GEVFRSGLTW RRGAGNIFYF RPGHETYPTY
HDATVHKVLR NAVKWAYNPQ GTYKAIHDAP NVPVEKALEP IVERGPRLHK AGEAGYR
|
|---|
| |