| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3626 |
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| Symbol | |
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| ID | 5318312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 60982 |
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| End bp | 62742 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775440 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001312373 |
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| Protein GI | 150375777 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TCGTCCATCC GGCCCTGATC TTCATTCTAG GCGCTCTGCC GATCCCGTTC
TTCACCGGAC TGGTGCGTAA ATCCTATCTC GTGTTGATCC CTGTGCTGGC GATCGTCGCC
GTCATGGCCA TAGAGCCCGG CAGTTATGGC GAGACGCAGT TCCTCGGTCA GGAAATTCTG
ATTGCGAAGG TCGACAAGCT GAGCATCGTC TTCGCTACCG TCTTCACCAT CATGGCGCTG
ATCGGCACGG TCTATGCATT GCACCTTTCC GGCGCCGGCG AGCATGTAGC CGCCTTCGTC
TATGTCGGCA GTGCGCTCGG GGTGGTGTTC GCAGGTGACT ATCTGACCCT CTATCTGTTC
TGGGAGGGCA TGGCATTCGC GTCGGCATAT CTGGTCTTCG CTCAAGGAGC GGGACAGGCG
ATCCGCGCTG CTTTTCGGTA TCTCATGGTC CACGTCACTG GGGGCGTCGT CCTGCTCGGT
GGCATTCTGC TCCATGGGGC GGCCGCTGGC TCACTGCTCT TCGGTCCGGT CGAGGGCGCT
TTGGACGCGG GTGCCTACCT CATTCTGGCC GGATTCTTGC TCAACGCGGC GGTGCCCCCA
CTCAATGCCT GGCTGACCGA TGCCTACCCG GAGGCGACCG TCACCGGCGC GGTGTTCATG
AGTGCCTTCA CGACCAAAAC CGCCGTCTAC GTGCTGGCGC GGGCGTTTCC GGGTATCGAA
CTGCTGGTCT GGCTCGGCAC GGTAATGGCG CTCTATGGCG TCATTTATGC GGTGCTGGAA
AACGACTGCC GCCGCCTTCT TGCCTATCAT ATCGTCAGTC AGGTGGGCTA CATGGTCGCG
GGCATCGGCA TCGGCACCGA GCTGGCGGTG AACGGAGCCA CCAGTCACGC CTTCGCGCAC
ATCCTTTACA AGGGGCTCCT GTTCATGGGT GCCGGGGCGG TGATCTATGT CACCGGCCGG
CGCAAGCTCT CCGAGCTTGG CGGGCTTTAC AAGGCAATGC CGCTGACGGT AGCGTTCTAT
ATGGCCGGGG CCCTTGCGAT CTCGGCATTC CCGTTCTTCT CGGGTTTTGT CAGCAAATCG
ATGGTGATAG CCGCAGCAGC GCAGGATCAC CGCGCGCTGG TCATGTTGGC GCTGACGATG
GCGTCGTCCG GGACGTTCCT GCATACTGGG CTCAAGCTCC CCTATTACAT GTTTCTCGGT
ACCGATCGGG GGCTGCAGGC ACGGGAGCCG CCCGGCAACA TGCTGGTCGC GATGGGTGTG
GCGGCGGCGC TCTGCATTGC CATTGGCATC TTCCCCGGGC CGCTCTACGC GCTTCTTCCC
TATCCTGTCG ATTTCGAGCC TTATACCGGC GTCCATGTGA GCGAGAGCCT CGGGATCCTG
ATGTTTACGG CTTTGGGCTT TGTGATCTTC CTTCGGGCGC TCGATCCCGA GAGCACGATC
AGCCTCGACA CCGACTGGTT CTACCGCAAG GGCGCCCGCG CCTTCATGTG GTTCGCAGAA
AGGCCGTTGG CGCGGTATGA GAAGGCGGTC AGCGACGTAT CGGAGACTGC GGTGCTGCCC
TTCCTGCACG GCTCGGCGCG CACGGGGATG CGGCTTGATC TCAATGGCGT GGATGGCGTG
GTGAATGGTG TCGCCCGATC GATCCTTGAC GGCGGCGGCG TACTGCGACG CTTGCAGACC
GGCGTCGTCA CCCACTACGT GCTGGCGATG ATCGCCGGTC TAATCGCGGC TATCCTCGTC
TTCGCGGTGG TGTGGAGGTA G
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| Protein sequence | MTDFVHPALI FILGALPIPF FTGLVRKSYL VLIPVLAIVA VMAIEPGSYG ETQFLGQEIL
IAKVDKLSIV FATVFTIMAL IGTVYALHLS GAGEHVAAFV YVGSALGVVF AGDYLTLYLF
WEGMAFASAY LVFAQGAGQA IRAAFRYLMV HVTGGVVLLG GILLHGAAAG SLLFGPVEGA
LDAGAYLILA GFLLNAAVPP LNAWLTDAYP EATVTGAVFM SAFTTKTAVY VLARAFPGIE
LLVWLGTVMA LYGVIYAVLE NDCRRLLAYH IVSQVGYMVA GIGIGTELAV NGATSHAFAH
ILYKGLLFMG AGAVIYVTGR RKLSELGGLY KAMPLTVAFY MAGALAISAF PFFSGFVSKS
MVIAAAAQDH RALVMLALTM ASSGTFLHTG LKLPYYMFLG TDRGLQAREP PGNMLVAMGV
AAALCIAIGI FPGPLYALLP YPVDFEPYTG VHVSESLGIL MFTALGFVIF LRALDPESTI
SLDTDWFYRK GARAFMWFAE RPLARYEKAV SDVSETAVLP FLHGSARTGM RLDLNGVDGV
VNGVARSILD GGGVLRRLQT GVVTHYVLAM IAGLIAAILV FAVVWR
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