Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3379 |
Symbol | |
ID | 5324263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3579975 |
End bp | 3580526 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792330 |
Product | hypothetical protein |
Protein accession | YP_001329035 |
Protein GI | 150398568 |
COG category | [S] Function unknown |
COG ID | [COG3807] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.393119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCG TCATGCGTCA CGTCATTTCC AGAATTTCCG CCCTCACCAT GGCAGCCCTG CTTGGAGCGG TTTTGACGGC CTCCACCGCC CATGCCCAGG CGGCGAAGGG TCCGAGCGGG CTTCCCCTCC CCCGTTTCGT CAGCCTGAAG GCGAAAAGCG TGAACCTGCG CATCGGCCCC AGCGTCGATT ACGCCGTCGC CTTCCGCTAT CTCAAGTCCG GCGTGCCCGT CGAGATCATC CAGGAATATG ACAATTGGCG CCGCATCCGC GACGCCGACG GTACCGAAGG CTGGGTGAAC CAGGCGCTCC TCTCCGGCGA CCGCACGGCG ATGGCAGCCC CCTGGATGCG CAGCAAAGGC GAAGGTGTTT TCGTCAATAT GCGCCGGGAT CCGCAAGGGA CGGCGCCGAT CGTCGCCCGC ATCGAACCGG GCGTGATGCT GCATATCGGC GAATGCAACG GCGACTGGTG CCATGCCGAG ACACAGGGCG TCGAGGGCTG GATCGCCCAG AGCGAGATAT GGGGGGCCTA TCCGGGCGAG GCCTTCAAGT AA
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Protein sequence | MSFVMRHVIS RISALTMAAL LGAVLTASTA HAQAAKGPSG LPLPRFVSLK AKSVNLRIGP SVDYAVAFRY LKSGVPVEII QEYDNWRRIR DADGTEGWVN QALLSGDRTA MAAPWMRSKG EGVFVNMRRD PQGTAPIVAR IEPGVMLHIG ECNGDWCHAE TQGVEGWIAQ SEIWGAYPGE AFK
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