Gene Smed_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3265 
Symbol 
ID5324144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3443673 
End bp3444191 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID640792213 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001328924 
Protein GI150398457 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATG AGCCGGCGGA GGTCAGCTTC GAGCCGGTGG CCGAGCGCCA TCTGCCGATG 
CTCCTTGCCT GGCTTTCAGA GCCGCATGTC CGGCAGTGGT GGGGCGATCC CGATGTGGAA
CTTGAACTGA TACGGGACGG TTGTGCGAAG GGCGAGGTCG ATGGTTTCGT CTTTCATGTG
AAGGGAGCAC CGACGGGCTA CATTCAGGCT TGGGTGCCTT CGGAATATGA CGAGGAGCCC
TGGGCCAAGG ACCTGTCGGC CGATACGCCC GGCGTCGACA TCTTCATCGG GCCTCCTGAA
ATGACCGGCA AGGGCGTCGC GGCTCTGGCG CTCAGGGCCT TTGCCGCAAG ACTGTTCGAA
AACGGCGCTG CCCGCATCGT CATCGACCCC GATGCCGGCA ATCGCCGCGC CGTCCGCGCC
TATTCGAAGG CCGGTTTCGT ACCCTTTGGC GAATGGATCG ACAAGTCCGG TCGAACCCTC
CTTATGGAGC TCAAGCGGAC GGAATTTGAG AGGAATTGA
 
Protein sequence
MPNEPAEVSF EPVAERHLPM LLAWLSEPHV RQWWGDPDVE LELIRDGCAK GEVDGFVFHV 
KGAPTGYIQA WVPSEYDEEP WAKDLSADTP GVDIFIGPPE MTGKGVAALA LRAFAARLFE
NGAARIVIDP DAGNRRAVRA YSKAGFVPFG EWIDKSGRTL LMELKRTEFE RN