Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3225 |
Symbol | |
ID | 5324104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3399877 |
End bp | 3401382 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792173 |
Product | Altronate dehydratase |
Protein accession | YP_001328884 |
Protein GI | 150398417 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGCAC CGTCATCGAT TCTTCTTTCA ACTGACGACA ACGTCGTCGT CGCCACCGCG GCGATCGCGC CGGGTGACAG GCTGGTCGGC GAAGTATCCG CAGTCGCGCG GATAGAGCCG GGCCACAAGG CCGCGGTCCG CGCGATCGAG GCAGGCGAGG CCGTGGTAAA ATATGGTCAG GCAATCGGCC GTGCCACCTC GCCCATTGCC CCTGGCGAAC ACGTCCATTC GCATAACCTC GCCTTCGATC AGGGTCGGCT GGCCATTGGC GCTCCCGTTC CGCCGGAGGC TGCGAGCGAG GCCGACAGGA CGCGCACATT CCTCGGCTAC CGCCGGGCGG ACGGGCGTGC GGCTACGCGC AACTATATCG GCATCGTCGC CAGCGTGAAC TGTTCCACCA CGGTCTGTCG CGCAATCGCC GATGAGGCGA ACCGGCGCGT CCTGCCCAAG TATGAAGGCA TCGACGGCTT CGTTCCGATC GTCCATGACC AGGGATGCGG CATGTCGTCC ACCGGCGACG GAATGAAGAA CCTGCACAGG ACGCTCGCCG GCTATGCGCG CCACGCGAAT TTCGGCGGCG TGCTGATGGT GGGGCTCGGT TGCGAGGTCA ATCAGCTGAC GCTCTACGGC CAGAGCGGAG CGGGGGCCGA GAAACGGCAT TTCAACATTC AGGAGGCTGG CGGTTCGCGC CGCTCGGTGG AACGCGCCCT CGGCATTCTC GAGGAGATCG CGAAGGAGGT AGCGACAGCC CGGCGTGTGC CGATCCCGGT CAGCGAAATC ATCGTCGGCC TGCAATGCGG TGGTTCGGAC GGTCTGTCGG GCATCACCGC CAACCCGGCG CTCGGTGCGG CGGTCGATAT ACTTGCCGGC GCCGGCGGCA CCGCCATCCT CTCCGAAACC TCCGAGATCT ACGGGGCCGA GCATCTGCTG CGCAGCCGCG CGGTCAACGA GGCGGTCGCG GTCAAGCTGG ACGGGCTGAT CGCTTGGTGG GAAGATTATG TGGCGATGCA TGGCGCATCG CTCGACAATA ATCCTTCGCC GGGTAACAAG AGGGGCGGTT TGACGACGAT CCTCGAAAAA TCGCTGGGTG CCGTCGCCAA GGGCGGCCGA TCGCCTTTGA CGGCCGTTTA TAATTACGCG GAACGCGTGA CGGAGCCCGG CCTGGTTTTC ATGGACACGC CCGGCTACGA TCCGGTCTCG GCAACCGGCC AGGTCGCCGG CGGCGCCAAC GTCATCGCGT TCACGACCGG ACGCGGCAGC TGTTTCGGGT GTCGGCCGGC GCCATCGATC AAGCTCACCA GCAACACGGC GCTTTATCAG GCGATGGAAG AGGACATGGA CATTGACTGC GGCATCATCG CATCGGGAGA AGCCACGATT GCAGGCATGG GCCGGGGGAT CTTCGATCTG ATCATAGAGA CCGCCTCGGG CCGCAAGACC AAGAGCGAGC TTTTCGGCTA CGGCGACAAC GAGTTCGTGC CATGGCACCT GGGGGCAACG CTTTAG
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Protein sequence | MPAPSSILLS TDDNVVVATA AIAPGDRLVG EVSAVARIEP GHKAAVRAIE AGEAVVKYGQ AIGRATSPIA PGEHVHSHNL AFDQGRLAIG APVPPEAASE ADRTRTFLGY RRADGRAATR NYIGIVASVN CSTTVCRAIA DEANRRVLPK YEGIDGFVPI VHDQGCGMSS TGDGMKNLHR TLAGYARHAN FGGVLMVGLG CEVNQLTLYG QSGAGAEKRH FNIQEAGGSR RSVERALGIL EEIAKEVATA RRVPIPVSEI IVGLQCGGSD GLSGITANPA LGAAVDILAG AGGTAILSET SEIYGAEHLL RSRAVNEAVA VKLDGLIAWW EDYVAMHGAS LDNNPSPGNK RGGLTTILEK SLGAVAKGGR SPLTAVYNYA ERVTEPGLVF MDTPGYDPVS ATGQVAGGAN VIAFTTGRGS CFGCRPAPSI KLTSNTALYQ AMEEDMDIDC GIIASGEATI AGMGRGIFDL IIETASGRKT KSELFGYGDN EFVPWHLGAT L
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