Gene Smed_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3158 
Symbol 
ID5324037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3316895 
End bp3318316 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content64% 
IMG OID640792106 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001328817 
Protein GI150398350 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACG AGCACCATAT CGACGCACTG GAGAAGCTCC TTGGCGACAA GGGCATCGTC 
ACGGGCCGGG AGGACATGGA AGCTTATGAG ACCGGCGCGC GCTATGACCG CGGCCGCGCG
GCCGCCGTAC TGCGTCCCGC CACCACCGAA GAAGCTTCCG CCGCCGTCGG CTACTGCGTC
CGCAACGGCA TTGCGCTCGT TCCGCAGGCG GGCAATACCG GCCTCGTATC GGGATCGACG
CCGGACGGGT CGGGCGAGGA GGTCGTCCTC AGCCTGGACC GGCTGACCCG CCGGTTCGCG
CTCGACCCCG ACAATCGCTC GGTACGCGTC GACGCCGGTT TCCGCCTGTC CGAACTCAAC
CGGCGGCTGG AGGAATATGA GCTGTTCTTC CCGATCGACC TCGGCGCCGA CCCGCGGATC
GGCGGCATGG TCGCGACCAA TACGGGCGGC TCGCGCTTTC TCAAATATGG CGACGTCCGC
CGCAATATAC TGGGCCTGAA GGTGGTACTC GCCGATGAGG CGGGCACCGT ACTGGACCTC
CACTCGGACC TGCGCAAGAA CAATACCGGG GTCGACTGGA AGCAGATCTT CATCGGCACG
TCCGGCGCCT TCGGGATCGT CACCGAATGC GTGCTCAATC TCGAGCGCCT GCCGAAGCAG
ACGGCGACTG CCTTCCTGGT ACCGGCAAGC GGCGCACATG TGCTGCCTCT CCTGAAAGCC
ATGGAAGAGC GGCTCGGCGC CTATCTCTCG GCCTTCGAGG GCATGTCGAA GAACGCGATC
GCCGGGGCTC TCGCCCATGT GCCGTCGCTC AAGAACCCGT TCCCGGGCGG CAACGTCCCC
GAATACGTCA TCCTCGCGGA AATCTCCCGG AGCTGGGCGC CGCGCGACGG CGAACAGCCA
CTCGATGCGG TGCTCGAAAG CGTACTTGCA GAGATATGGG AAACGGAGGA AGCGCCGCTC
GCAGACGCGC TCGTCGGCCC GCCGCATGAA GTCTGGGCGC TGCGCCACGC CCTTTCGGAA
GGCGTGAAGC ACCTCGGCAA GCTGATCGCC TTCGACCTCT CCTTCCGCAG GGGTGACATC
ATGACCTTCT GTGATCATAT GAAGGCCGAA ATGCCGCAGA AATTTCCTGC TGTCACAATC
TGCGACTTCG GCCATATCGG CGACGGCGGT GTCCACTTCA ACGTCGTGGT TGCGAAGGAC
AGTCCGCTTC TGGCCGATGC GGCCTTCGAG CAGCACCTGC GCGAATGGGT CGTCGCGATC
GCCGTCGAGC AATATCATGG CAGCTTCAGC GCCGAACATG CGCTCGGCCG CCGCAATCAG
GCCTTTTACG ATTTCTACAC GCCGGAAAAA CTGAAGAACA TCGCCGCCGG CCTCAAGACG
CTCACCTCGC CGGGAAAGCT CGGCAGCGTG CGTTTCGGGT AG
 
Protein sequence
MIDEHHIDAL EKLLGDKGIV TGREDMEAYE TGARYDRGRA AAVLRPATTE EASAAVGYCV 
RNGIALVPQA GNTGLVSGST PDGSGEEVVL SLDRLTRRFA LDPDNRSVRV DAGFRLSELN
RRLEEYELFF PIDLGADPRI GGMVATNTGG SRFLKYGDVR RNILGLKVVL ADEAGTVLDL
HSDLRKNNTG VDWKQIFIGT SGAFGIVTEC VLNLERLPKQ TATAFLVPAS GAHVLPLLKA
MEERLGAYLS AFEGMSKNAI AGALAHVPSL KNPFPGGNVP EYVILAEISR SWAPRDGEQP
LDAVLESVLA EIWETEEAPL ADALVGPPHE VWALRHALSE GVKHLGKLIA FDLSFRRGDI
MTFCDHMKAE MPQKFPAVTI CDFGHIGDGG VHFNVVVAKD SPLLADAAFE QHLREWVVAI
AVEQYHGSFS AEHALGRRNQ AFYDFYTPEK LKNIAAGLKT LTSPGKLGSV RFG