| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2806 |
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| Symbol | |
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| ID | 5323676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2931286 |
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| End bp | 2934279 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791751 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_001328471 |
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| Protein GI | 150398004 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.448623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCGGC AGTCCTTGCG GGACCGGGAG TCCCGACCTC CGATACATCC AGAAGGAGAC
GGAAAGATCG AATACGCGGA GAAATTGCTT GCTCTTTTCA TTCTTGTCCC GTTTGCGGGA
AGCCTCATTG CAATCTTTTT CCCGTCCGAT CAACGCGGTG CGATAGCCTG GTTCGCAGGC
GCGATTGCGC TCGTCTGTTT CCTGATAACC GCCGGGCTCT TTCCCTATGT CGCCTCGGGT
GGCGTGCTCA GATACCGGCT GGACTGGATC CCGGAGCTCG GGCTGAACTT CACCCTCAGG
ATGGACGGCT TCGCCTGGCT GTTTTCTGCC CTGATCACGG CGATCGGCTT TCTCGTCGTC
CTCTATGCCC GCTATTATAT GGCCCAGGAA GATCCGGTGC CGCGGTTCTT CGCGCTCTTT
CTTGCCTTCA TGGGCTCGAT GCTGGGCGTC GTGCTGTCCG GCAACCTCAT TCTGCTGGCC
GTCTTCTGGG AACTGACAAG CATCGTCTCC TTCCTGCTTA TCGGCTATTG GCACCATAAC
GCACACGCCC GCGACGGCGC TCGTATGGCC CTGACGATCA CCGGCACCGG CGGCCTTGCA
ATGCTTGTCG GCCTGATAAT CATGGGAAAG ATCGTCGGCA GCTATGAACT CGACGCTGTT
CTCGCTTCGG GCGACACGAT CCGCAACCAT CCGCTTTACG GCACAGTGCT GATCCTTATT
CTGCTCGGGG CATTGACGAA GAGCGCACAG TTCCCCTTCC ATTTCTGGCT GCCGCACGCC
ATGGCGGCGC CGACGCCGGT TTCCGCCTTT CTGCATTCGG CGACGATGGT CAAGGCCGGC
GTCTTCCTGC TTGTGCGGTT CTGGCCGGTC ATGGCCGGCA CGGAAGCATG GTTCTGGATT
GTCGGCCTTG CGGGCCTGAC GACGCTCCTG ATCGGGGCTT ATTTCGCTAT CTTTCAGCAG
GATCTGAAAG GGCTGCTCGC CTATTCGACG ATCAGCCATC TCGGACTCAT CACCGTGCTC
TTGAGCCTTG GCAGTCCGCT GGCGGCCGTC GCCGCCATCT TCCACATCGT CAACCACGCG
ACCTTCAAGG CCTCGCTCTT CATGGCGGCC GGCATCATCG ACCACGAAAC CGGAACGCGC
GACATGCGCA GGCTGAGCGG GCTGTTCCAC TTCATGCCGA TCACCGCGAC GCTGGCGATG
GTGGCAAGTG CCGCCATGGC CGGAGTGCCG TTGCTCAACG GTTTCCTGTC CAAGGAAATG
TTCTTTGCCG AGGCGGTCGA GACGCATCTC GTCAACGCGC TCGACACGGT CACGCCCTAT
GTGGCGACGA TCGCGGGCAT GTTCGCGGTT ACCTATTCGC TCCGCTTCAT CCACGGCGTC
TTCTTCGGTC AGCCACCGGC GAACCTTCCA AGAAAGCCTC ATGAGCCGCC GCGCTGGATG
CGGGCGCCGG TCGACTTCCT CGTCCTGGCC TGCCTGGTCG TCGGTATAAT TCCTGCACAG
ACAATCGGCC CCTTCCTTCA TGCCGCCGTT GTCTCGGTCC TGCGCGAGGA AACGCCCTAT
TACAGCCTTG CGGTCTGGCA TGGCTGGAAC CTGCCCCTGA TCATGAGCTT CGTCGCGCTT
TCAGGCGGCA TCGGCCTCTA TCTCCTGATG CGCTCCTATC TCGCCACGGC CGTCGAGGGT
CCGCCGGTCT TCCGTCTGCT GCAGGGCCAG CGTATCTTCG AGCGCGTGCT GGTGACGCTC
TCGTGGAAAT GGGCCAGGTG GCTTGAACAG CGGCTCGGCA CGCGCCGTCT CCAACCGCAG
ATGCGTCTCC TCGTTTTTCT GGCGCTTGCG GCAGGGGCGT CGCCGCTCCT TTTCGGTGCA
TTCGAACTGC CTGCACTCGT GATCCGTGGA ATCGATCCCG CCTTCGCTCT GCTCTGGGCG
ATCGGCATTG CCTGCGCAGT CGGTTCCGCT TACCAGGCGA AATTCCACCG TCTCGCCTCT
CTGGTGCTTC TCGGCGGCGC AGGGCTGGTC ACCTGTATCA CTTTCGTCTG GCTTTCCGCA
CCCGATCTTG CGGTCACGCA GCTCCTCGTC GAAATCGTCA CCACCGTCCT CATTCTCCTC
GGATTGCGCT GGCTGCCGAA ACGCATCGAG GAGCCGGTGG CTGCTGAGGA CATCTCGATC
AGGGTGCGCT TAAGGCGCTT GCGCGACGTC CTGCTGGCGG TCGCCGCCGG CGGGGGAATG
ATGCTCATCG CCTATACCGT GATGACACGG CCCCTTCCCG AGACGATCGC CAGCTATTTT
CTCGAGCGCG CCTACAAGGA GGGCGGCGGT GCCAATGTCG TCAACGTCAT TCTCGTCGAT
TTCCGCGGCT TCGATACGCT CGGAGAGATC GCCGTGCTCT GCATCGTAGC GCTCACGGTC
TTCGCGCTTC TCCTGCGCTT CCGCCCGCAA TCCGACAGCC TCGAGACGCC GGAGCAGCAA
CGGGTGCAGA ACGCCTTCGA CGACGACCAT CCCGACCGCG ACGCAGGCGA CAGCGTCGCC
GAATATCTCT TCATCCCGTC AGTGATCATG CGCTGGATGT TTCCGGTCAC CGGCATGCTC
GCGGCCTTTC TGTTCCTGCG CGGCCACGAC CTTCCAGGCG GCGGTTTTGC CGCCGGCATC
GCCATGTCGA TCGGCTTTAT CCTGCAATAT ATGTCCGGCG GCACCCGCTG GGTTGAGGAA
CGGCTCCGCA TCCATCCGCT TCGCTGGATG AGCATCGGCC TCCTCGTGGC AACGGCGACG
GGTGTCGGAT CCTGGTTCTT CGGCTATCCT TTCCTCACCT CCCACGCGCA ATATGCGAGC
CTGCCGGTGG TCGGCAAATT CCCGCTTGCA ACCGCGATCC TGTTCGACCT CGGTGTCTTT
TCGCTCGTCC TCGGCGCCAC CGTGCTCATC CTGATCGCGC TGGCGCACCA GTCAGTGCGT
GCACCGCGTG CGCAAGCAAG GGCTGCGCGC TCCGAGAAGG GAGCGGTATC GTAA
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| Protein sequence | MRRQSLRDRE SRPPIHPEGD GKIEYAEKLL ALFILVPFAG SLIAIFFPSD QRGAIAWFAG
AIALVCFLIT AGLFPYVASG GVLRYRLDWI PELGLNFTLR MDGFAWLFSA LITAIGFLVV
LYARYYMAQE DPVPRFFALF LAFMGSMLGV VLSGNLILLA VFWELTSIVS FLLIGYWHHN
AHARDGARMA LTITGTGGLA MLVGLIIMGK IVGSYELDAV LASGDTIRNH PLYGTVLILI
LLGALTKSAQ FPFHFWLPHA MAAPTPVSAF LHSATMVKAG VFLLVRFWPV MAGTEAWFWI
VGLAGLTTLL IGAYFAIFQQ DLKGLLAYST ISHLGLITVL LSLGSPLAAV AAIFHIVNHA
TFKASLFMAA GIIDHETGTR DMRRLSGLFH FMPITATLAM VASAAMAGVP LLNGFLSKEM
FFAEAVETHL VNALDTVTPY VATIAGMFAV TYSLRFIHGV FFGQPPANLP RKPHEPPRWM
RAPVDFLVLA CLVVGIIPAQ TIGPFLHAAV VSVLREETPY YSLAVWHGWN LPLIMSFVAL
SGGIGLYLLM RSYLATAVEG PPVFRLLQGQ RIFERVLVTL SWKWARWLEQ RLGTRRLQPQ
MRLLVFLALA AGASPLLFGA FELPALVIRG IDPAFALLWA IGIACAVGSA YQAKFHRLAS
LVLLGGAGLV TCITFVWLSA PDLAVTQLLV EIVTTVLILL GLRWLPKRIE EPVAAEDISI
RVRLRRLRDV LLAVAAGGGM MLIAYTVMTR PLPETIASYF LERAYKEGGG ANVVNVILVD
FRGFDTLGEI AVLCIVALTV FALLLRFRPQ SDSLETPEQQ RVQNAFDDDH PDRDAGDSVA
EYLFIPSVIM RWMFPVTGML AAFLFLRGHD LPGGGFAAGI AMSIGFILQY MSGGTRWVEE
RLRIHPLRWM SIGLLVATAT GVGSWFFGYP FLTSHAQYAS LPVVGKFPLA TAILFDLGVF
SLVLGATVLI LIALAHQSVR APRAQARAAR SEKGAVS
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