| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2701 |
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| Symbol | |
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| ID | 5323570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2808315 |
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| End bp | 2809670 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791645 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001328366 |
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| Protein GI | 150397899 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.260631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGT CAAGGCAGCA GACTATCGCC GCGGATGCGC CGGAAGGGGG CTGGACGACC
CTCATCGACG ACATCCTCGC CGGCAACTGG GTCAATCCCG AAACGGGTAG CCCGGCAACG
GTTCCCTACG AGAGGATCGT CATCGAAGAG AGCCTCGACG GCGCGGAGGC CGATCTCGTC
GCCAGCCTCC GTCTCGGGGA GCGCTTTACG GTCGTCGCCG ACGAACGCAC CTGGGATGCG
ATGGGCGGGC GCGTCGCATC GGCTCTGAAA AGCCTGGGTC CGGTCGATAC CGTCATTCTC
GACCATCCGC ACGCCGACAT GGCAGCCGTG AACGATCTCG ACGAGAGGCT CGCGAAAGCC
GACGCCGTGG TCGCGGTGGG GTCCGGCACA ATCAACGATC TCTGCAAATT CGTCACCGGA
CGTACCAACC GCCGTTACGC AATCTTCGCC ACGGCCGGCT CGATGAACGG CTACACGTCC
ACGACAGCCT CCATCACCCT GGAAAACGGC CTCAAGGTCT CGCTGCCGTC CCATGCGCCG
GCGGGCTTCT TCGTCGATCT GGCGGTCAAC GCCGCAGCAC CGCGCCATCT TTCTGCTGCG
GGTTTCGCCG ATTGCCTCGT CCGCTCCGTC GCCCAGATCG ACTGGTGGAT GTCGCACCGG
CTGATCGGCA GCGTCTATTC GAGCGTGCCC TATATGATTC AGGACGCCGA CGAGCGGGCC
CTGAATAGCT GTGCGGCCGG TATTGCCCGA GGGAGCATCA GCGCGAACGG TTATCTTCAC
CGTGTGCTGA CGCTTTGCGG CTTGGGTGTT TCCTTCACGG GCATGTCGAA CCACGGCTCG
ATGGGCGAGC ATCAGGTCTC CCACTATATC GACTGCTTTG CCGGCGAGGG ACATCCGGGC
ACGCTCCACG GCCAGCAGGT CGGCGTCGCA ACGCTCACCA TGGCGCGGCT GCAACGCATC
TTTCTCGACA GCGACAAGCC GCCGGTCATC GGCCCCACAC GGATTGACCC TGCGGACATG
GCCCGGCGCA TGGGCGATGA CATAGCCGCC CAGTGCTACG CCGAAATCCA GCCGAAGATT
TTCGATGAAC GATCTGCCGC CGAGATGAAT GAAAGGCTCG CCGAGCTCTG GCCTACGCTG
CGCCAGGAAC TCGAGGCTTT CGCGCTGCCG GTAGCTCAGA TGGAGCAGCT CTTGCGGGAT
GCCGGCGGCC CGATGACGGC GGCCGAACTC GGCCTGTCGG GCGGTTTCTA CCGCGAGGCC
GTGCTGCACT GCCGCGAAAT GCGCAACCGT TACACCTTCC TCGATATTGC CGCCGACACG
GGCATGCTCG AGGATTTCGT TGCCGGGGAG GCGTAA
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| Protein sequence | METSRQQTIA ADAPEGGWTT LIDDILAGNW VNPETGSPAT VPYERIVIEE SLDGAEADLV
ASLRLGERFT VVADERTWDA MGGRVASALK SLGPVDTVIL DHPHADMAAV NDLDERLAKA
DAVVAVGSGT INDLCKFVTG RTNRRYAIFA TAGSMNGYTS TTASITLENG LKVSLPSHAP
AGFFVDLAVN AAAPRHLSAA GFADCLVRSV AQIDWWMSHR LIGSVYSSVP YMIQDADERA
LNSCAAGIAR GSISANGYLH RVLTLCGLGV SFTGMSNHGS MGEHQVSHYI DCFAGEGHPG
TLHGQQVGVA TLTMARLQRI FLDSDKPPVI GPTRIDPADM ARRMGDDIAA QCYAEIQPKI
FDERSAAEMN ERLAELWPTL RQELEAFALP VAQMEQLLRD AGGPMTAAEL GLSGGFYREA
VLHCREMRNR YTFLDIAADT GMLEDFVAGE A
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