Gene Smed_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2428 
Symbol 
ID5323289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2506490 
End bp2507212 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content61% 
IMG OID640791366 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001328095 
Protein GI150397628 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC CGATCAAGAA CCCCGCAGCA GAAACGGTCC CGCGCCAGCC CGGTCTGGCG 
GGGCTCGCAG CCGACTGGGC CTCCGACCAG CGCACGTTCA AGGACGTCTC CTGGGGCAAG
GCCATGATGT GGATCTTTCT CCTCAGCGAC ACCTTCGTCT TCGGCTGCTT CCTGATCGCC
TACATGGCGG CACGAATGTC TACCGCCGTT CCCTGGCCGA ACCCGAGCGA GGTTTTCGCA
CTCGAGATCG GCGGAACACA TATGCCGCTG ATCCTGATCG CGATCATGAC ATTCGTCCTC
ATCTCCTCGA GCGGCACCAT GGCCATGGCC GTCAACTACG GTTATCGCCG GGACCGGCGG
AAGACCGCGG CACTCATGCT GCTGACGGCG CTATTCGGCG CCGCCTTCGT CGGCATGCAG
GCGTTCGAAT GGTCGAAACT GATTGCCGAG GGCGTAAGAC CGTGGGCCAA TCCCTGGGGA
GCCGCACAAT TCGGCTCTTC CTTCTTCATG ATCACCGGCT TTCACGGGAC CCACGTCACC
TTCGGCGTGA TTTTCCTGCT GATCATCGCC CGAAAAGTCT GGCGCGGCGA CTTCGAAACG
GAGCGGCCCG GTTTCTTCAC CAGCCGCAAG GGCCGCTACG AGATCGTCGA GATCACCGGC
CTCTATTGGC ACTTCGTCGA CCTGGTCTGG GTCTTCATCT TCGCATTCTT TTATCTGTGG
TGA
 
Protein sequence
MSAPIKNPAA ETVPRQPGLA GLAADWASDQ RTFKDVSWGK AMMWIFLLSD TFVFGCFLIA 
YMAARMSTAV PWPNPSEVFA LEIGGTHMPL ILIAIMTFVL ISSSGTMAMA VNYGYRRDRR
KTAALMLLTA LFGAAFVGMQ AFEWSKLIAE GVRPWANPWG AAQFGSSFFM ITGFHGTHVT
FGVIFLLIIA RKVWRGDFET ERPGFFTSRK GRYEIVEITG LYWHFVDLVW VFIFAFFYLW