| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2171 |
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| Symbol | |
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| ID | 5323031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2241752 |
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| End bp | 2242513 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791109 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001327839 |
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| Protein GI | 150397372 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0299033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTGA AAGACCGGAT CGCGATCGTG ACCGGAGCGG GCTCCGGGAT CGGCCAGGCG
GGTGCCGCCA TCATGGCGCG CGAAGGCGCG CATGTGGTGG TCGTGGACCG AAGCGTGAAT
GCCTGCGAAG ACACCGTAGC GGCAATCGCA GTCAGCGGCG GCAGCGCCGA AGCACTCGCC
ATCGACGTCA CCGATGACGA CGCGCTCGCG GACGGCATCG CCGCTGTCCT TTACCGGCAC
GGCCGCATCG ACATCCTGCA CAACCACGCC GGCGCACAGG TCGCAGGCGA TCTGGAAGGG
GTCGAGGTGG CGGGCTTTGA CCGCTCCTGG AACCTCAACG TCCGCGCACA TTTTATGGCC
GCCCGGTTCG TCATGCCGTC GATGAGGGCA GCCGGCCGTG GCGTGATCGT CAACACGTCG
TCATCATCCG GGGTGCTCTA TGATCGTGAG ATGATCGCCT ATACGACGAC GAAGCACGCG
GTCATCGCCA TGACCCGGCA GATGGCCGGC GATTACGCGA AGTACGGCGT CCGGGTGAAC
GCACTCTGCC CGGGTTGGGT CGACACGCCT TTCAACGAGC CTTTCATCGC CCAGATGGGC
GGGCGCGGCG CAATCGAGGC CTATATCCGC CAGAAGGTGC CGCTCGGCCG CTGGGCCAGC
GTCGATGAGA TCGCCGAATC GATCCTCTTC CTTGTTTCCG ACCGTTCTTC CTACATGACC
GGGCAGATCC TCGTGGTGGA CGGTGGCGAG ACGATCGTTT GA
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| Protein sequence | MILKDRIAIV TGAGSGIGQA GAAIMAREGA HVVVVDRSVN ACEDTVAAIA VSGGSAEALA
IDVTDDDALA DGIAAVLYRH GRIDILHNHA GAQVAGDLEG VEVAGFDRSW NLNVRAHFMA
ARFVMPSMRA AGRGVIVNTS SSSGVLYDRE MIAYTTTKHA VIAMTRQMAG DYAKYGVRVN
ALCPGWVDTP FNEPFIAQMG GRGAIEAYIR QKVPLGRWAS VDEIAESILF LVSDRSSYMT
GQILVVDGGE TIV
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