Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2166 |
Symbol | |
ID | 5323026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2236676 |
End bp | 2237419 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791104 |
Product | response regulator receiver protein |
Protein accession | YP_001327834 |
Protein GI | 150397367 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACG AGGCTGTCGG GGATACGTTC CGAACTCTGA TGTCCACCCT GATGACGTTC GATTATGTCG TCGTCTTCGC GTATCGCGGC AAGGAACGGC CGCTCGATCT GTACAGCACC TTCGACGCCG AGGATCATGT GCTCTTCGTG ACCCTCTACC AGGCCGGGCC TTACCTGCTC GACCCGTTCT ATCATGCCGC GCGTGCGCCC AAACCCGGCG TGTGGCGCAT GCGGGAACTG GCTCCCGACC GCTTCTTTTC AAGCGAATAT TACCGGACCT ATTATGTCCA GACGGGGCTT GCCGAGGAAG TCGGCTTCTT CGTTCCCGTC AGTGAACAGG TCACCGTCGT CCTTTCTTTG ATGCGGCGCG AGGCGACGGG GGTATTCGGC GCCGCGGAGT TCGCGCTGCT CAGGAAGGCG GAGCCGCTGG TGGCGGCCCT CGTGCGGCAT CATTGGGCGG AACTCGACCG CCGCTTCGAT ACCGCGCTTG CAAGAACGGA GAGGGGCCGC CGCAAATCGG TGCATCCGCC GGCAGACGGC GTCTGGCGGC ATCTCAATCT CACAGAGCGC GAGGCGGCGA TCATCGAACT CGTGCTGCAG GGGCATTCCT CCGAATCGAT CGGACTGAAG CTCGGGATCT CGACGGGGAC CGTGAAAGTC CACCGCCGCA ACGTCTACCG GAAGCTCGGC ATTTCCTCGC AGACACAGCT CCTGTCTCTC TACATCAAGA ATCTCGGTCA CTGA
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Protein sequence | MDDEAVGDTF RTLMSTLMTF DYVVVFAYRG KERPLDLYST FDAEDHVLFV TLYQAGPYLL DPFYHAARAP KPGVWRMREL APDRFFSSEY YRTYYVQTGL AEEVGFFVPV SEQVTVVLSL MRREATGVFG AAEFALLRKA EPLVAALVRH HWAELDRRFD TALARTERGR RKSVHPPADG VWRHLNLTER EAAIIELVLQ GHSSESIGLK LGISTGTVKV HRRNVYRKLG ISSQTQLLSL YIKNLGH
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