| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2014 |
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| Symbol | |
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| ID | 5322873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2064642 |
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| End bp | 2066150 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790951 |
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| Product | protease Do |
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| Protein accession | YP_001327682 |
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| Protein GI | 150397215 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGAAAC GACCCGAATT CTTCCGCGGC CTGGCGCTCG CGGCCGCGAC GGCACTCATT
TTCACCAATA CGGCGCTTGC CCAGACGGCC ACGTCACGGC CTCCGGCCGG TCCTCCATCC
GTCGCGGATC TTGCCGAGGG ACTGCTCGAC GCAGTCGTCA ACATATCGAT TTCGCAGAAC
GTCAAGGGCG ACGACGACAA TGCGCCGATA CCGCAGGTGC CGGAAGGGTC ACCCCATCAG
GAGTTCTTCG ACGAATTTTT CAGGGGTCCG GGAGGCGAGG GCGGCCGGCC GCGCACCGTC
AATTCGCTGG GTTCAGGCTT TATCATCGAT CCCGCGGGCT ACATTGTCAC CAACAACCAC
GTGATCCAGG ATGCCGACGA TATCGAAATC AATTTCTCCG ACGGCACGAA GCTGAAGGCG
AAACTGGTCG GCATGGATAC GAAAACCGAC CTCGCCCTGC TGAAGGTCGA ACCGAAAAAG
CCGCTCAAAG CCGTCTCTTT CGGTGATTCG CGAAAGATCA GGATCGGCGA TTGGGTGATG
GTGGTCGGCA ATCCGTTCGG TCTCGGCGTT TCCGTTTCCG TGGGCGTCGT CTCCGCACGC
GGCCGCAATA TCAATGCCGG CCCCTATGAC AGTTTCATCC AGACCGACGC GGCGATCAAT
CGCGGCAATT CGGGCGGACC GCTTTTCAAC ATGCAAGGCG AAGTCGTCGG CATCAATACG
GCGATCCTTT CGCAGACCGG CATGTCGGTC GGAATAGGCT TCGCCGTGCC GGCGGAGCTT
GCCGTCAACG TTGTAAACCA GCTCAAGGAA TTCGGCGAAA CCCGCCGCGG TTGGCTTGGC
GTTCGAATCC AGCCCGTCAC CGATGACATC GCCGAGAGCC TGAAAATGGA GCTGCCGCGC
GGCGCGCTCG TATCGGGCAT CATCGAGGGC GGCCCGATTA CCAAAGGTGA AATCAAGCCG
GGCGACATTA TCATCCGCTT CGACGGAACG GATATCGCGG AGATTCGGGA CCTCATGCGC
ACCGTCGGAG AGAGCCCCGT CGGCAAGGCC GTCGATGTGG TGATCATCCG TGACGGCAAG
GAGCAGTTGG TCCGCGTGAC ACTGGGCCGG CTGGAAGATG GCGAGCAGCT CGCCAATGCG
AAACCGGGTG AGATGCCGGA GAGCAGTGAT GCGAAGCCCG GCGAACCGCC TGCCGCGCAA
CTGCCGGCAA GCGACACCGT GCTCGGCATG AAGCTCGCAG AGCTCGACAC TGACCGCCGC
CAGAGTTTCG GAATCGCCGA AAACGTCAAA GGCGTCGTCA TTACCGAGGT GCAGCCCAAT
TCGCCCGCGG CCGAGCGCCG GGTTGAGGTG GGCGAGGTGA TCGTCGAACT TGGTCAGGAA
GCAATGGAGA CGCCGGAGGA TGTCACCTCA CGCGTCACGG AACTCAAGGC TGACGGGCGC
CGCAACGCTT TGCTGATGAT CGCCAACAAA AGCGGCGAAC TGCGCTTCGT GACGGTACGG
ATGGAGTGA
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| Protein sequence | MSKRPEFFRG LALAAATALI FTNTALAQTA TSRPPAGPPS VADLAEGLLD AVVNISISQN
VKGDDDNAPI PQVPEGSPHQ EFFDEFFRGP GGEGGRPRTV NSLGSGFIID PAGYIVTNNH
VIQDADDIEI NFSDGTKLKA KLVGMDTKTD LALLKVEPKK PLKAVSFGDS RKIRIGDWVM
VVGNPFGLGV SVSVGVVSAR GRNINAGPYD SFIQTDAAIN RGNSGGPLFN MQGEVVGINT
AILSQTGMSV GIGFAVPAEL AVNVVNQLKE FGETRRGWLG VRIQPVTDDI AESLKMELPR
GALVSGIIEG GPITKGEIKP GDIIIRFDGT DIAEIRDLMR TVGESPVGKA VDVVIIRDGK
EQLVRVTLGR LEDGEQLANA KPGEMPESSD AKPGEPPAAQ LPASDTVLGM KLAELDTDRR
QSFGIAENVK GVVITEVQPN SPAAERRVEV GEVIVELGQE AMETPEDVTS RVTELKADGR
RNALLMIANK SGELRFVTVR ME
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